Gene : Seita.3G037800 S. italica v2.2
Defline:  (1 of 1) PTHR12203:SF13 - F10K1.7 PROTEIN Genomic Order:  378
Name:  ? Seita.3G037800 Secondary Identifier:  ? PAC:32709785
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G037800 0.5kb upstream 0.5kb upstream 2923 true scaffold_3: 2313384-2316306 Setaria italica
Seita.3G037800 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2315807-2316306 Setaria italica
Seita.3G037800 0.5kb downstream 0.5kb downstream 2923 true scaffold_3: 2312884-2315806 Setaria italica
Seita.3G037800 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2312884-2313383 Setaria italica
Seita.3G037800 1.0kb upstream 1.0kb upstream 3423 true scaffold_3: 2313384-2316806 Setaria italica
Seita.3G037800 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2315807-2316806 Setaria italica
Seita.3G037800 1.0kb downstream 1.0kb downstream 3423 true scaffold_3: 2312384-2315806 Setaria italica
Seita.3G037800 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2312384-2313383 Setaria italica
Seita.3G037800 2.0kb upstream 2.0kb upstream 4423 true scaffold_3: 2313384-2317806 Setaria italica
Seita.3G037800 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2315807-2317806 Setaria italica
Seita.3G037800 2.0kb downstream 2.0kb downstream 4423 true scaffold_3: 2311384-2315806 Setaria italica
Seita.3G037800 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2311384-2313383 Setaria italica
Seita.3G037800 5.0kb upstream 5.0kb upstream 7423 true scaffold_3: 2313384-2320806 Setaria italica
Seita.3G037800 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2315807-2320806 Setaria italica
Seita.3G037800 5.0kb downstream 5.0kb downstream 7423 true scaffold_3: 2308384-2315806 Setaria italica
Seita.3G037800 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2308384-2313383 Setaria italica
Seita.3G037800 10.0kb upstream 10.0kb upstream 12423 true scaffold_3: 2313384-2325806 Setaria italica
Seita.3G037800 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2315807-2325806 Setaria italica
Seita.3G037800 10.0kb downstream 10.0kb downstream 12423 true scaffold_3: 2303384-2315806 Setaria italica
Seita.3G037800 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2303384-2313383 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181715 5267 Panicoideae View MSA
124571103 5269 Grass View MSA
122042631 5273 Angiosperm View MSA
121309992 5274 Embryophyte View MSA
123428833 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.381        
cufflinks 0.645        
cufflinks 0.562        
cufflinks 0.803        
cufflinks 0.758        
cufflinks 0.858        
cufflinks 0.762        
cufflinks 0.677        
cufflinks 0.608        
cufflinks 0.564        
cufflinks 0.253        
cufflinks 0.081     Low Low
cufflinks 0.151     Low Low
cufflinks 1.321       High
cufflinks 0.097     Low Low
cufflinks 0.909        
cufflinks 0.182       Low
cufflinks 0.281        
cufflinks 0.738        
cufflinks 0.201        

0 Strain