Gene : Seita.3G044000 S. italica v2.2
Defline:  (1 of 1) PTHR24115:SF515 - KINESIN MOTOR PROTEIN-RELATED PROTEIN-RELATED Genomic Order:  440
Name:  ? Seita.3G044000 Secondary Identifier:  ? PAC:32710564
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G044000 0.5kb upstream 0.5kb upstream 7064 true scaffold_3: 2684579-2691642 Setaria italica
Seita.3G044000 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 2691143-2691642 Setaria italica
Seita.3G044000 0.5kb downstream 0.5kb downstream 7064 true scaffold_3: 2684079-2691142 Setaria italica
Seita.3G044000 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 2684079-2684578 Setaria italica
Seita.3G044000 1.0kb upstream 1.0kb upstream 7564 true scaffold_3: 2684579-2692142 Setaria italica
Seita.3G044000 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 2691143-2692142 Setaria italica
Seita.3G044000 1.0kb downstream 1.0kb downstream 7564 true scaffold_3: 2683579-2691142 Setaria italica
Seita.3G044000 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 2683579-2684578 Setaria italica
Seita.3G044000 2.0kb upstream 2.0kb upstream 8564 true scaffold_3: 2684579-2693142 Setaria italica
Seita.3G044000 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 2691143-2693142 Setaria italica
Seita.3G044000 2.0kb downstream 2.0kb downstream 8564 true scaffold_3: 2682579-2691142 Setaria italica
Seita.3G044000 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 2682579-2684578 Setaria italica
Seita.3G044000 5.0kb upstream 5.0kb upstream 11564 true scaffold_3: 2684579-2696142 Setaria italica
Seita.3G044000 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 2691143-2696142 Setaria italica
Seita.3G044000 5.0kb downstream 5.0kb downstream 11564 true scaffold_3: 2679579-2691142 Setaria italica
Seita.3G044000 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 2679579-2684578 Setaria italica
Seita.3G044000 10.0kb upstream 10.0kb upstream 16564 true scaffold_3: 2684579-2701142 Setaria italica
Seita.3G044000 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 2691143-2701142 Setaria italica
Seita.3G044000 10.0kb downstream 10.0kb downstream 16564 true scaffold_3: 2674579-2691142 Setaria italica
Seita.3G044000 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 2674579-2684578 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185592 5267 Panicoideae View MSA
124582277 5269 Grass View MSA
122043163 5273 Angiosperm View MSA
123429039 5275 Viridiplantae View MSA
121350162 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.739     High High
cufflinks 20.38     High High
cufflinks 1.223       Low
cufflinks 0.736       Low
cufflinks 1.279       Low
cufflinks 16.957     High High
cufflinks 13.263        
cufflinks 12.516        
cufflinks 9.81        
cufflinks 4.073        
cufflinks 13.351        
cufflinks 6.229        
cufflinks 7.38        
cufflinks 0.813       Low
cufflinks 9.514        
cufflinks 6.189        
cufflinks 6.091        
cufflinks 2.328        
cufflinks 0.582       Low
cufflinks 8.942        

0 Strain