Gene : Seita.3G142900 S. italica v2.2
Defline:  (1 of 71) KOG0254 - Predicted transporter (major facilitator superfamily) Genomic Order:  1429
Name:  ? Seita.3G142900 Secondary Identifier:  ? PAC:32714792
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G142900 0.5kb upstream 0.5kb upstream 5337 true scaffold_3: 10047580-10052916 Setaria italica
Seita.3G142900 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 10052417-10052916 Setaria italica
Seita.3G142900 0.5kb downstream 0.5kb downstream 5337 true scaffold_3: 10047080-10052416 Setaria italica
Seita.3G142900 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 10047080-10047579 Setaria italica
Seita.3G142900 1.0kb upstream 1.0kb upstream 5837 true scaffold_3: 10047580-10053416 Setaria italica
Seita.3G142900 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 10052417-10053416 Setaria italica
Seita.3G142900 1.0kb downstream 1.0kb downstream 5837 true scaffold_3: 10046580-10052416 Setaria italica
Seita.3G142900 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 10046580-10047579 Setaria italica
Seita.3G142900 2.0kb upstream 2.0kb upstream 6837 true scaffold_3: 10047580-10054416 Setaria italica
Seita.3G142900 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 10052417-10054416 Setaria italica
Seita.3G142900 2.0kb downstream 2.0kb downstream 6837 true scaffold_3: 10045580-10052416 Setaria italica
Seita.3G142900 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 10045580-10047579 Setaria italica
Seita.3G142900 5.0kb upstream 5.0kb upstream 9837 true scaffold_3: 10047580-10057416 Setaria italica
Seita.3G142900 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 10052417-10057416 Setaria italica
Seita.3G142900 5.0kb downstream 5.0kb downstream 9837 true scaffold_3: 10042580-10052416 Setaria italica
Seita.3G142900 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 10042580-10047579 Setaria italica
Seita.3G142900 10.0kb upstream 10.0kb upstream 14837 true scaffold_3: 10047580-10062416 Setaria italica
Seita.3G142900 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 10052417-10062416 Setaria italica
Seita.3G142900 10.0kb downstream 10.0kb downstream 14837 true scaffold_3: 10037580-10052416 Setaria italica
Seita.3G142900 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 10037580-10047579 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179123 5267 Panicoideae View MSA
124583509 5269 Grass View MSA
122041971 5273 Angiosperm View MSA
123429172 5275 Viridiplantae View MSA
121350723 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.844        
cufflinks 1.797        
cufflinks 2.346        
cufflinks 2.473        
cufflinks 1.103        
cufflinks 2.198        
cufflinks 1.267        
cufflinks 1.229        
cufflinks 0.545       Low
cufflinks 3.253        
cufflinks 5.063        
cufflinks 8.172       High
cufflinks 8.289       High
cufflinks 3.6        
cufflinks 9.356       High
cufflinks 0.866       Low
cufflinks 7.939       High
cufflinks 0.904       Low
cufflinks 1.846        
cufflinks 13.835       High

0 Strain