Gene : Seita.3G145400 S. italica v2.2
Defline:  (1 of 2) PTHR12399 - EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 7 Genomic Order:  1454
Name:  ? Seita.3G145400 Secondary Identifier:  ? PAC:32710105
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G145400 0.5kb upstream 0.5kb upstream 9288 true scaffold_3: 10432709-10441996 Setaria italica
Seita.3G145400 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 10441497-10441996 Setaria italica
Seita.3G145400 0.5kb downstream 0.5kb downstream 9288 true scaffold_3: 10432209-10441496 Setaria italica
Seita.3G145400 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 10432209-10432708 Setaria italica
Seita.3G145400 1.0kb upstream 1.0kb upstream 9788 true scaffold_3: 10432709-10442496 Setaria italica
Seita.3G145400 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 10441497-10442496 Setaria italica
Seita.3G145400 1.0kb downstream 1.0kb downstream 9788 true scaffold_3: 10431709-10441496 Setaria italica
Seita.3G145400 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 10431709-10432708 Setaria italica
Seita.3G145400 2.0kb upstream 2.0kb upstream 10788 true scaffold_3: 10432709-10443496 Setaria italica
Seita.3G145400 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 10441497-10443496 Setaria italica
Seita.3G145400 2.0kb downstream 2.0kb downstream 10788 true scaffold_3: 10430709-10441496 Setaria italica
Seita.3G145400 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 10430709-10432708 Setaria italica
Seita.3G145400 5.0kb upstream 5.0kb upstream 13788 true scaffold_3: 10432709-10446496 Setaria italica
Seita.3G145400 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 10441497-10446496 Setaria italica
Seita.3G145400 5.0kb downstream 5.0kb downstream 13788 true scaffold_3: 10427709-10441496 Setaria italica
Seita.3G145400 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 10427709-10432708 Setaria italica
Seita.3G145400 10.0kb upstream 10.0kb upstream 18788 true scaffold_3: 10432709-10451496 Setaria italica
Seita.3G145400 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 10441497-10451496 Setaria italica
Seita.3G145400 10.0kb downstream 10.0kb downstream 18788 true scaffold_3: 10422709-10441496 Setaria italica
Seita.3G145400 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 10422709-10432708 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041522 5273 Angiosperm View MSA
122178035 5267 Panicoideae View MSA
124572558 5269 Grass View MSA
121344825 5274 Embryophyte View MSA
123426210 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.451        
cufflinks 1.835        
cufflinks 1.381        
cufflinks 0.817       Low
cufflinks 1.323        
cufflinks 2.105        
cufflinks 1.873        
cufflinks 2.075        
cufflinks 2.691       High
cufflinks 1.904        
cufflinks 2.15        
cufflinks 1.35        
cufflinks 0.924       Low
cufflinks 1.742        
cufflinks 2.021        
cufflinks 0.82       Low
cufflinks 1.821        
cufflinks 0.934       Low
cufflinks 1.264        
cufflinks 2.01        

0 Strain