Gene : Seita.3G148800 S. italica v2.2
Defline:  (1 of 16) PF03759 - PRONE (Plant-specific Rop nucleotide exchanger) (PRONE) Genomic Order:  1488
Name:  ? Seita.3G148800 Secondary Identifier:  ? PAC:32711993
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G148800 0.5kb upstream 0.5kb upstream 3474 true scaffold_3: 10725040-10728513 Setaria italica
Seita.3G148800 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 10725040-10725539 Setaria italica
Seita.3G148800 0.5kb downstream 0.5kb downstream 3474 true scaffold_3: 10725540-10729013 Setaria italica
Seita.3G148800 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 10728514-10729013 Setaria italica
Seita.3G148800 1.0kb upstream 1.0kb upstream 3974 true scaffold_3: 10724540-10728513 Setaria italica
Seita.3G148800 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 10724540-10725539 Setaria italica
Seita.3G148800 1.0kb downstream 1.0kb downstream 3974 true scaffold_3: 10725540-10729513 Setaria italica
Seita.3G148800 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 10728514-10729513 Setaria italica
Seita.3G148800 2.0kb upstream 2.0kb upstream 4974 true scaffold_3: 10723540-10728513 Setaria italica
Seita.3G148800 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 10723540-10725539 Setaria italica
Seita.3G148800 2.0kb downstream 2.0kb downstream 4974 true scaffold_3: 10725540-10730513 Setaria italica
Seita.3G148800 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 10728514-10730513 Setaria italica
Seita.3G148800 5.0kb upstream 5.0kb upstream 7974 true scaffold_3: 10720540-10728513 Setaria italica
Seita.3G148800 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 10720540-10725539 Setaria italica
Seita.3G148800 5.0kb downstream 5.0kb downstream 7974 true scaffold_3: 10725540-10733513 Setaria italica
Seita.3G148800 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 10728514-10733513 Setaria italica
Seita.3G148800 10.0kb upstream 10.0kb upstream 12974 true scaffold_3: 10715540-10728513 Setaria italica
Seita.3G148800 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 10715540-10725539 Setaria italica
Seita.3G148800 10.0kb downstream 10.0kb downstream 12974 true scaffold_3: 10725540-10738513 Setaria italica
Seita.3G148800 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 10728514-10738513 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186849 5267 Panicoideae View MSA
124577341 5269 Grass View MSA
122041932 5273 Angiosperm View MSA
121309904 5274 Embryophyte View MSA
123347537 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.52        
cufflinks 2.172        
cufflinks 0.41       Low
cufflinks 0.454       Low
cufflinks 0.357       Low
cufflinks 2.298        
cufflinks 1.386        
cufflinks 1.37        
cufflinks 1.13        
cufflinks 1.487        
cufflinks 1.849        
cufflinks 2.088        
cufflinks 1.288        
cufflinks 0.382       Low
cufflinks 1.317        
cufflinks 1.22        
cufflinks 4.004       High
cufflinks 1.785        
cufflinks 0.295       Low
cufflinks 1.669        

0 Strain