Gene : Seita.3G173600 S. italica v2.2
Defline:  (1 of 1) PTHR13691//PTHR13691:SF18 - RIBOSOMAL PROTEIN L2 Genomic Order:  1736
Name:  ? Seita.3G173600 Secondary Identifier:  ? PAC:32711529
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G173600 0.5kb upstream 0.5kb upstream 1386 true scaffold_3: 12872092-12873477 Setaria italica
Seita.3G173600 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 12872978-12873477 Setaria italica
Seita.3G173600 0.5kb downstream 0.5kb downstream 1386 true scaffold_3: 12871592-12872977 Setaria italica
Seita.3G173600 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 12871592-12872091 Setaria italica
Seita.3G173600 1.0kb upstream 1.0kb upstream 1886 true scaffold_3: 12872092-12873977 Setaria italica
Seita.3G173600 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 12872978-12873977 Setaria italica
Seita.3G173600 1.0kb downstream 1.0kb downstream 1886 true scaffold_3: 12871092-12872977 Setaria italica
Seita.3G173600 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 12871092-12872091 Setaria italica
Seita.3G173600 2.0kb upstream 2.0kb upstream 2886 true scaffold_3: 12872092-12874977 Setaria italica
Seita.3G173600 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 12872978-12874977 Setaria italica
Seita.3G173600 2.0kb downstream 2.0kb downstream 2886 true scaffold_3: 12870092-12872977 Setaria italica
Seita.3G173600 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 12870092-12872091 Setaria italica
Seita.3G173600 5.0kb upstream 5.0kb upstream 5886 true scaffold_3: 12872092-12877977 Setaria italica
Seita.3G173600 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 12872978-12877977 Setaria italica
Seita.3G173600 5.0kb downstream 5.0kb downstream 5886 true scaffold_3: 12867092-12872977 Setaria italica
Seita.3G173600 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 12867092-12872091 Setaria italica
Seita.3G173600 10.0kb upstream 10.0kb upstream 10886 true scaffold_3: 12872092-12882977 Setaria italica
Seita.3G173600 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 12872978-12882977 Setaria italica
Seita.3G173600 10.0kb downstream 10.0kb downstream 10886 true scaffold_3: 12862092-12872977 Setaria italica
Seita.3G173600 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 12862092-12872091 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031176 5273 Angiosperm View MSA
122192097 5267 Panicoideae View MSA
124583761 5269 Grass View MSA
121300265 5274 Embryophyte View MSA
123338055 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.06     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.093     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain