Gene : Seita.3G104900 S. italica v2.2
Defline:  (1 of 1) PTHR10992//PTHR10992:SF822 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN Genomic Order:  1049
Name:  ? Seita.3G104900 Secondary Identifier:  ? PAC:32710972
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G104900 0.5kb upstream 0.5kb upstream 1587 true scaffold_3: 6884343-6885929 Setaria italica
Seita.3G104900 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 6885430-6885929 Setaria italica
Seita.3G104900 0.5kb downstream 0.5kb downstream 1587 true scaffold_3: 6883843-6885429 Setaria italica
Seita.3G104900 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 6883843-6884342 Setaria italica
Seita.3G104900 1.0kb upstream 1.0kb upstream 2087 true scaffold_3: 6884343-6886429 Setaria italica
Seita.3G104900 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 6885430-6886429 Setaria italica
Seita.3G104900 1.0kb downstream 1.0kb downstream 2087 true scaffold_3: 6883343-6885429 Setaria italica
Seita.3G104900 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 6883343-6884342 Setaria italica
Seita.3G104900 2.0kb upstream 2.0kb upstream 3087 true scaffold_3: 6884343-6887429 Setaria italica
Seita.3G104900 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 6885430-6887429 Setaria italica
Seita.3G104900 2.0kb downstream 2.0kb downstream 3087 true scaffold_3: 6882343-6885429 Setaria italica
Seita.3G104900 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 6882343-6884342 Setaria italica
Seita.3G104900 5.0kb upstream 5.0kb upstream 6087 true scaffold_3: 6884343-6890429 Setaria italica
Seita.3G104900 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 6885430-6890429 Setaria italica
Seita.3G104900 5.0kb downstream 5.0kb downstream 6087 true scaffold_3: 6879343-6885429 Setaria italica
Seita.3G104900 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 6879343-6884342 Setaria italica
Seita.3G104900 10.0kb upstream 10.0kb upstream 11087 true scaffold_3: 6884343-6895429 Setaria italica
Seita.3G104900 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 6885430-6895429 Setaria italica
Seita.3G104900 10.0kb downstream 10.0kb downstream 11087 true scaffold_3: 6874343-6885429 Setaria italica
Seita.3G104900 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 6874343-6884342 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186026 5267 Panicoideae View MSA
124568780 5269 Grass View MSA
122048522 5273 Angiosperm View MSA
123428977 5275 Viridiplantae View MSA
121350361 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.016     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain