Gene : Seita.3G114300 S. italica v2.2
Defline:  (1 of 2) PTHR11909:SF73 - PROTEIN KINASE FAMILY PROTEIN Genomic Order:  1143
Name:  ? Seita.3G114300 Secondary Identifier:  ? PAC:32709926
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G114300 0.5kb upstream 0.5kb upstream 9438 true scaffold_3: 7702275-7711712 Setaria italica
Seita.3G114300 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 7711213-7711712 Setaria italica
Seita.3G114300 0.5kb downstream 0.5kb downstream 9438 true scaffold_3: 7701775-7711212 Setaria italica
Seita.3G114300 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 7701775-7702274 Setaria italica
Seita.3G114300 1.0kb upstream 1.0kb upstream 9938 true scaffold_3: 7702275-7712212 Setaria italica
Seita.3G114300 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 7711213-7712212 Setaria italica
Seita.3G114300 1.0kb downstream 1.0kb downstream 9938 true scaffold_3: 7701275-7711212 Setaria italica
Seita.3G114300 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 7701275-7702274 Setaria italica
Seita.3G114300 2.0kb upstream 2.0kb upstream 10938 true scaffold_3: 7702275-7713212 Setaria italica
Seita.3G114300 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 7711213-7713212 Setaria italica
Seita.3G114300 2.0kb downstream 2.0kb downstream 10938 true scaffold_3: 7700275-7711212 Setaria italica
Seita.3G114300 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 7700275-7702274 Setaria italica
Seita.3G114300 5.0kb upstream 5.0kb upstream 13938 true scaffold_3: 7702275-7716212 Setaria italica
Seita.3G114300 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 7711213-7716212 Setaria italica
Seita.3G114300 5.0kb downstream 5.0kb downstream 13938 true scaffold_3: 7697275-7711212 Setaria italica
Seita.3G114300 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 7697275-7702274 Setaria italica
Seita.3G114300 10.0kb upstream 10.0kb upstream 18938 true scaffold_3: 7702275-7721212 Setaria italica
Seita.3G114300 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 7711213-7721212 Setaria italica
Seita.3G114300 10.0kb downstream 10.0kb downstream 18938 true scaffold_3: 7692275-7711212 Setaria italica
Seita.3G114300 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 7692275-7702274 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122182070 5267 Panicoideae View MSA
124578925 5269 Grass View MSA
122042474 5273 Angiosperm View MSA
121348190 5274 Embryophyte View MSA
123427857 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.708       High
cufflinks 3.912        
cufflinks 2.654        
cufflinks 2.031        
cufflinks 1.687        
cufflinks 2.894        
cufflinks 4.717        
cufflinks 1.768        
cufflinks 1.791        
cufflinks 3.325        
cufflinks 3.94        
cufflinks 1.991        
cufflinks 1.724        
cufflinks 2.251        
cufflinks 2.849        
cufflinks 8.015       High
cufflinks 1.696        
cufflinks 14.043     High High
cufflinks 2.315        
cufflinks 1.93        

0 Strain