Gene : Seita.3G132000 S. italica v2.2
Defline:  (1 of 1) PTHR10925 - N-ACETYLTRANSFERASE 10 Genomic Order:  1320
Name:  ? Seita.3G132000 Secondary Identifier:  ? PAC:32711774
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G132000 0.5kb upstream 0.5kb upstream 9198 true scaffold_3: 9145704-9154901 Setaria italica
Seita.3G132000 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 9145704-9146203 Setaria italica
Seita.3G132000 0.5kb downstream 0.5kb downstream 9198 true scaffold_3: 9146204-9155401 Setaria italica
Seita.3G132000 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 9154902-9155401 Setaria italica
Seita.3G132000 1.0kb upstream 1.0kb upstream 9698 true scaffold_3: 9145204-9154901 Setaria italica
Seita.3G132000 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 9145204-9146203 Setaria italica
Seita.3G132000 1.0kb downstream 1.0kb downstream 9698 true scaffold_3: 9146204-9155901 Setaria italica
Seita.3G132000 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 9154902-9155901 Setaria italica
Seita.3G132000 2.0kb upstream 2.0kb upstream 10698 true scaffold_3: 9144204-9154901 Setaria italica
Seita.3G132000 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 9144204-9146203 Setaria italica
Seita.3G132000 2.0kb downstream 2.0kb downstream 10698 true scaffold_3: 9146204-9156901 Setaria italica
Seita.3G132000 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 9154902-9156901 Setaria italica
Seita.3G132000 5.0kb upstream 5.0kb upstream 13698 true scaffold_3: 9141204-9154901 Setaria italica
Seita.3G132000 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 9141204-9146203 Setaria italica
Seita.3G132000 5.0kb downstream 5.0kb downstream 13698 true scaffold_3: 9146204-9159901 Setaria italica
Seita.3G132000 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 9154902-9159901 Setaria italica
Seita.3G132000 10.0kb upstream 10.0kb upstream 18698 true scaffold_3: 9136204-9154901 Setaria italica
Seita.3G132000 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 9136204-9146203 Setaria italica
Seita.3G132000 10.0kb downstream 10.0kb downstream 18698 true scaffold_3: 9146204-9164901 Setaria italica
Seita.3G132000 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 9154902-9164901 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181440 5267 Panicoideae View MSA
124581092 5269 Grass View MSA
122042891 5273 Angiosperm View MSA
121344057 5274 Embryophyte View MSA
123424540 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.163        
cufflinks 9.75        
cufflinks 3.655        
cufflinks 1.103       Low
cufflinks 2.443       Low
cufflinks 11.4       High
cufflinks 4.919        
cufflinks 5.413        
cufflinks 8.283        
cufflinks 4.982        
cufflinks 8.916        
cufflinks 6.513        
cufflinks 5.513        
cufflinks 6.757        
cufflinks 9.66        
cufflinks 3.72        
cufflinks 8.523        
cufflinks 3.755        
cufflinks 1.643       Low
cufflinks 9.259        

0 Strain