Gene : Seita.3G218300 S. italica v2.2
Defline:  (1 of 2) PTHR22883:SF92 - PROTEIN S-ACYLTRANSFERASE 16-RELATED Genomic Order:  2183
Name:  ? Seita.3G218300 Secondary Identifier:  ? PAC:32714626
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G218300 0.5kb upstream 0.5kb upstream 4089 true scaffold_3: 17680854-17684942 Setaria italica
Seita.3G218300 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 17684443-17684942 Setaria italica
Seita.3G218300 0.5kb downstream 0.5kb downstream 4089 true scaffold_3: 17680354-17684442 Setaria italica
Seita.3G218300 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 17680354-17680853 Setaria italica
Seita.3G218300 1.0kb upstream 1.0kb upstream 4589 true scaffold_3: 17680854-17685442 Setaria italica
Seita.3G218300 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 17684443-17685442 Setaria italica
Seita.3G218300 1.0kb downstream 1.0kb downstream 4589 true scaffold_3: 17679854-17684442 Setaria italica
Seita.3G218300 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 17679854-17680853 Setaria italica
Seita.3G218300 2.0kb upstream 2.0kb upstream 5589 true scaffold_3: 17680854-17686442 Setaria italica
Seita.3G218300 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 17684443-17686442 Setaria italica
Seita.3G218300 2.0kb downstream 2.0kb downstream 5589 true scaffold_3: 17678854-17684442 Setaria italica
Seita.3G218300 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 17678854-17680853 Setaria italica
Seita.3G218300 5.0kb upstream 5.0kb upstream 8589 true scaffold_3: 17680854-17689442 Setaria italica
Seita.3G218300 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 17684443-17689442 Setaria italica
Seita.3G218300 5.0kb downstream 5.0kb downstream 8589 true scaffold_3: 17675854-17684442 Setaria italica
Seita.3G218300 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 17675854-17680853 Setaria italica
Seita.3G218300 10.0kb upstream 10.0kb upstream 13589 true scaffold_3: 17680854-17694442 Setaria italica
Seita.3G218300 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 17684443-17694442 Setaria italica
Seita.3G218300 10.0kb downstream 10.0kb downstream 13589 true scaffold_3: 17670854-17684442 Setaria italica
Seita.3G218300 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 17670854-17680853 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122184938 5267 Panicoideae View MSA
124583112 5269 Grass View MSA
122049119 5273 Angiosperm View MSA
121349855 5274 Embryophyte View MSA
123428148 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.798        
cufflinks 5.822        
cufflinks 3.327       Low
cufflinks 3.519        
cufflinks 2.884       Low
cufflinks 6.903       High
cufflinks 4.162        
cufflinks 6.227        
cufflinks 3.527        
cufflinks 4.986        
cufflinks 5.171        
cufflinks 7.205       High
cufflinks 6.267        
cufflinks 2.99       Low
cufflinks 6.307        
cufflinks 3.927        
cufflinks 7.154       High
cufflinks 4.269        
cufflinks 3.303       Low
cufflinks 7.135       High

0 Strain