Gene : Seita.3G221400 S. italica v2.2
Defline:  (1 of 1) 4.6.1.2 - Guanylate cyclase / Guanylyl cyclase Genomic Order:  2214
Name:  ? Seita.3G221400 Secondary Identifier:  ? PAC:32710638
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G221400 0.5kb upstream 0.5kb upstream 4034 true scaffold_3: 17952141-17956174 Setaria italica
Seita.3G221400 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 17952141-17952640 Setaria italica
Seita.3G221400 0.5kb downstream 0.5kb downstream 4034 true scaffold_3: 17952641-17956674 Setaria italica
Seita.3G221400 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 17956175-17956674 Setaria italica
Seita.3G221400 1.0kb upstream 1.0kb upstream 4534 true scaffold_3: 17951641-17956174 Setaria italica
Seita.3G221400 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 17951641-17952640 Setaria italica
Seita.3G221400 1.0kb downstream 1.0kb downstream 4534 true scaffold_3: 17952641-17957174 Setaria italica
Seita.3G221400 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 17956175-17957174 Setaria italica
Seita.3G221400 2.0kb upstream 2.0kb upstream 5534 true scaffold_3: 17950641-17956174 Setaria italica
Seita.3G221400 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 17950641-17952640 Setaria italica
Seita.3G221400 2.0kb downstream 2.0kb downstream 5534 true scaffold_3: 17952641-17958174 Setaria italica
Seita.3G221400 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 17956175-17958174 Setaria italica
Seita.3G221400 5.0kb upstream 5.0kb upstream 8534 true scaffold_3: 17947641-17956174 Setaria italica
Seita.3G221400 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 17947641-17952640 Setaria italica
Seita.3G221400 5.0kb downstream 5.0kb downstream 8534 true scaffold_3: 17952641-17961174 Setaria italica
Seita.3G221400 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 17956175-17961174 Setaria italica
Seita.3G221400 10.0kb upstream 10.0kb upstream 13534 true scaffold_3: 17942641-17956174 Setaria italica
Seita.3G221400 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 17942641-17952640 Setaria italica
Seita.3G221400 10.0kb downstream 10.0kb downstream 13534 true scaffold_3: 17952641-17966174 Setaria italica
Seita.3G221400 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 17956175-17966174 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041010 5273 Angiosperm View MSA
122184955 5267 Panicoideae View MSA
124577626 5269 Grass View MSA
121344846 5274 Embryophyte View MSA
123428245 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.829        
cufflinks 13.111       High
cufflinks 13.213     High High
cufflinks 12.563     High  
cufflinks 8.829        
cufflinks 14.741     High High
cufflinks 6.255       Low
cufflinks 13.125       High
cufflinks 10.841        
cufflinks 8.023        
cufflinks 7.288        
cufflinks 9.751        
cufflinks 14.406     High High
cufflinks 13.313       High
cufflinks 6.469       Low
cufflinks 4.606       Low
cufflinks 9.064        
cufflinks 7.543        
cufflinks 6.706        
cufflinks 6.588        

0 Strain