Gene : Seita.3G232000 S. italica v2.2
Defline:  (1 of 1) PTHR11089:SF36 - GTP-BINDING PROTEIN Genomic Order:  2320
Name:  ? Seita.3G232000 Secondary Identifier:  ? PAC:32712467
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G232000 0.5kb upstream 0.5kb upstream 8068 true scaffold_3: 19168653-19176720 Setaria italica
Seita.3G232000 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 19168653-19169152 Setaria italica
Seita.3G232000 0.5kb downstream 0.5kb downstream 8068 true scaffold_3: 19169153-19177220 Setaria italica
Seita.3G232000 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 19176721-19177220 Setaria italica
Seita.3G232000 1.0kb upstream 1.0kb upstream 8568 true scaffold_3: 19168153-19176720 Setaria italica
Seita.3G232000 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 19168153-19169152 Setaria italica
Seita.3G232000 1.0kb downstream 1.0kb downstream 8568 true scaffold_3: 19169153-19177720 Setaria italica
Seita.3G232000 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 19176721-19177720 Setaria italica
Seita.3G232000 2.0kb upstream 2.0kb upstream 9568 true scaffold_3: 19167153-19176720 Setaria italica
Seita.3G232000 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 19167153-19169152 Setaria italica
Seita.3G232000 2.0kb downstream 2.0kb downstream 9568 true scaffold_3: 19169153-19178720 Setaria italica
Seita.3G232000 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 19176721-19178720 Setaria italica
Seita.3G232000 5.0kb upstream 5.0kb upstream 12568 true scaffold_3: 19164153-19176720 Setaria italica
Seita.3G232000 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 19164153-19169152 Setaria italica
Seita.3G232000 5.0kb downstream 5.0kb downstream 12568 true scaffold_3: 19169153-19181720 Setaria italica
Seita.3G232000 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 19176721-19181720 Setaria italica
Seita.3G232000 10.0kb upstream 10.0kb upstream 17568 true scaffold_3: 19159153-19176720 Setaria italica
Seita.3G232000 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 19159153-19169152 Setaria italica
Seita.3G232000 10.0kb downstream 10.0kb downstream 17568 true scaffold_3: 19169153-19186720 Setaria italica
Seita.3G232000 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 19176721-19186720 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185070 5267 Panicoideae View MSA
124580268 5269 Grass View MSA
122042277 5273 Angiosperm View MSA
121346792 5274 Embryophyte View MSA
123427603 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.475        
cufflinks 2.82        
cufflinks 3.154        
cufflinks 2.639        
cufflinks 4.632        
cufflinks 2.766        
cufflinks 7.857       High
cufflinks 5.572        
cufflinks 9.875       High
cufflinks 1.236        
cufflinks 1.851        
cufflinks 0.364       Low
cufflinks 1.104        
cufflinks 4.792        
cufflinks 0.736       Low
cufflinks 8.811       High
cufflinks 0.363       Low
cufflinks 3.447        
cufflinks 2.39        
cufflinks 0.367       Low

0 Strain