Gene : Seita.3G189600 S. italica v2.2
Defline:  (1 of 6) PTHR11926//PTHR11926:SF261 - GLUCOSYL/GLUCURONOSYL TRANSFERASES Genomic Order:  1896
Name:  ? Seita.3G189600 Secondary Identifier:  ? PAC:32712161
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G189600 0.5kb upstream 0.5kb upstream 1943 true scaffold_3: 14355883-14357825 Setaria italica
Seita.3G189600 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14355883-14356382 Setaria italica
Seita.3G189600 0.5kb downstream 0.5kb downstream 1943 true scaffold_3: 14356383-14358325 Setaria italica
Seita.3G189600 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14357826-14358325 Setaria italica
Seita.3G189600 1.0kb upstream 1.0kb upstream 2443 true scaffold_3: 14355383-14357825 Setaria italica
Seita.3G189600 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14355383-14356382 Setaria italica
Seita.3G189600 1.0kb downstream 1.0kb downstream 2443 true scaffold_3: 14356383-14358825 Setaria italica
Seita.3G189600 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14357826-14358825 Setaria italica
Seita.3G189600 2.0kb upstream 2.0kb upstream 3443 true scaffold_3: 14354383-14357825 Setaria italica
Seita.3G189600 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14354383-14356382 Setaria italica
Seita.3G189600 2.0kb downstream 2.0kb downstream 3443 true scaffold_3: 14356383-14359825 Setaria italica
Seita.3G189600 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14357826-14359825 Setaria italica
Seita.3G189600 5.0kb upstream 5.0kb upstream 6443 true scaffold_3: 14351383-14357825 Setaria italica
Seita.3G189600 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14351383-14356382 Setaria italica
Seita.3G189600 5.0kb downstream 5.0kb downstream 6443 true scaffold_3: 14356383-14362825 Setaria italica
Seita.3G189600 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14357826-14362825 Setaria italica
Seita.3G189600 10.0kb upstream 10.0kb upstream 11443 true scaffold_3: 14346383-14357825 Setaria italica
Seita.3G189600 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14346383-14356382 Setaria italica
Seita.3G189600 10.0kb downstream 10.0kb downstream 11443 true scaffold_3: 14356383-14367825 Setaria italica
Seita.3G189600 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14357826-14367825 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029969 5273 Angiosperm View MSA
122064983 5267 Panicoideae View MSA
124364303 5269 Grass View MSA
121299213 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.013     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.012     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.022     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.062     Low High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.011     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low High

0 Strain