Gene : Seita.3G189900 S. italica v2.2
Defline:  (1 of 6) PTHR11926//PTHR11926:SF261 - GLUCOSYL/GLUCURONOSYL TRANSFERASES Genomic Order:  1899
Name:  ? Seita.3G189900 Secondary Identifier:  ? PAC:32712269
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G189900 0.5kb upstream 0.5kb upstream 2552 true scaffold_3: 14363250-14365801 Setaria italica
Seita.3G189900 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14363250-14363749 Setaria italica
Seita.3G189900 0.5kb downstream 0.5kb downstream 2552 true scaffold_3: 14363750-14366301 Setaria italica
Seita.3G189900 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14365802-14366301 Setaria italica
Seita.3G189900 1.0kb upstream 1.0kb upstream 3052 true scaffold_3: 14362750-14365801 Setaria italica
Seita.3G189900 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14362750-14363749 Setaria italica
Seita.3G189900 1.0kb downstream 1.0kb downstream 3052 true scaffold_3: 14363750-14366801 Setaria italica
Seita.3G189900 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14365802-14366801 Setaria italica
Seita.3G189900 2.0kb upstream 2.0kb upstream 4052 true scaffold_3: 14361750-14365801 Setaria italica
Seita.3G189900 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14361750-14363749 Setaria italica
Seita.3G189900 2.0kb downstream 2.0kb downstream 4052 true scaffold_3: 14363750-14367801 Setaria italica
Seita.3G189900 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14365802-14367801 Setaria italica
Seita.3G189900 5.0kb upstream 5.0kb upstream 7052 true scaffold_3: 14358750-14365801 Setaria italica
Seita.3G189900 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14358750-14363749 Setaria italica
Seita.3G189900 5.0kb downstream 5.0kb downstream 7052 true scaffold_3: 14363750-14370801 Setaria italica
Seita.3G189900 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14365802-14370801 Setaria italica
Seita.3G189900 10.0kb upstream 10.0kb upstream 12052 true scaffold_3: 14353750-14365801 Setaria italica
Seita.3G189900 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14353750-14363749 Setaria italica
Seita.3G189900 10.0kb downstream 10.0kb downstream 12052 true scaffold_3: 14363750-14375801 Setaria italica
Seita.3G189900 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14365802-14375801 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029969 5273 Angiosperm View MSA
122189530 5267 Panicoideae View MSA
124585326 5269 Grass View MSA
121299213 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.69        
cufflinks 0.206        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.01     Low Low
cufflinks 0.063     Low  
cufflinks 0.602        
cufflinks 0.728        
cufflinks 0.241        
cufflinks 0.257     Low  
cufflinks 19.028     High High
cufflinks 2.376        
cufflinks 18.537     High High
cufflinks 0.012     Low Low
cufflinks 7.903       High
cufflinks 0.049     Low Low
cufflinks 2.5        
cufflinks 0.077     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 7.853       High

0 Strain