Gene : Seita.3G189800 S. italica v2.2
Defline:  (1 of 6) PTHR11926//PTHR11926:SF261 - GLUCOSYL/GLUCURONOSYL TRANSFERASES Genomic Order:  1898
Name:  ? Seita.3G189800 Secondary Identifier:  ? PAC:32710083
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G189800 0.5kb upstream 0.5kb upstream 2120 true scaffold_3: 14359492-14361611 Setaria italica
Seita.3G189800 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14359492-14359991 Setaria italica
Seita.3G189800 0.5kb downstream 0.5kb downstream 2120 true scaffold_3: 14359992-14362111 Setaria italica
Seita.3G189800 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14361612-14362111 Setaria italica
Seita.3G189800 1.0kb upstream 1.0kb upstream 2620 true scaffold_3: 14358992-14361611 Setaria italica
Seita.3G189800 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14358992-14359991 Setaria italica
Seita.3G189800 1.0kb downstream 1.0kb downstream 2620 true scaffold_3: 14359992-14362611 Setaria italica
Seita.3G189800 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14361612-14362611 Setaria italica
Seita.3G189800 2.0kb upstream 2.0kb upstream 3620 true scaffold_3: 14357992-14361611 Setaria italica
Seita.3G189800 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14357992-14359991 Setaria italica
Seita.3G189800 2.0kb downstream 2.0kb downstream 3620 true scaffold_3: 14359992-14363611 Setaria italica
Seita.3G189800 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14361612-14363611 Setaria italica
Seita.3G189800 5.0kb upstream 5.0kb upstream 6620 true scaffold_3: 14354992-14361611 Setaria italica
Seita.3G189800 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14354992-14359991 Setaria italica
Seita.3G189800 5.0kb downstream 5.0kb downstream 6620 true scaffold_3: 14359992-14366611 Setaria italica
Seita.3G189800 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14361612-14366611 Setaria italica
Seita.3G189800 10.0kb upstream 10.0kb upstream 11620 true scaffold_3: 14349992-14361611 Setaria italica
Seita.3G189800 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14349992-14359991 Setaria italica
Seita.3G189800 10.0kb downstream 10.0kb downstream 11620 true scaffold_3: 14359992-14371611 Setaria italica
Seita.3G189800 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14361612-14371611 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029969 5273 Angiosperm View MSA
122189530 5267 Panicoideae View MSA
124585326 5269 Grass View MSA
121299213 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.827        
cufflinks 0.018     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.038     Low  
cufflinks 0.066     Low  
cufflinks 0.01     Low Low
cufflinks 3.262       High
cufflinks 2.195       High
cufflinks 0.291        
cufflinks 1.655       High
cufflinks 0.015     Low Low
cufflinks 0.978        
cufflinks 0.036     Low  
cufflinks 0.266        
cufflinks 0.013     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.001        

0 Strain