Gene : Seita.3G190000 S. italica v2.2
Defline:  (1 of 6) PTHR11926//PTHR11926:SF261 - GLUCOSYL/GLUCURONOSYL TRANSFERASES Genomic Order:  1900
Name:  ? Seita.3G190000 Secondary Identifier:  ? PAC:32710296
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G190000 0.5kb upstream 0.5kb upstream 1964 true scaffold_3: 14371639-14373602 Setaria italica
Seita.3G190000 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 14373103-14373602 Setaria italica
Seita.3G190000 0.5kb downstream 0.5kb downstream 1964 true scaffold_3: 14371139-14373102 Setaria italica
Seita.3G190000 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 14371139-14371638 Setaria italica
Seita.3G190000 1.0kb upstream 1.0kb upstream 2464 true scaffold_3: 14371639-14374102 Setaria italica
Seita.3G190000 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 14373103-14374102 Setaria italica
Seita.3G190000 1.0kb downstream 1.0kb downstream 2464 true scaffold_3: 14370639-14373102 Setaria italica
Seita.3G190000 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 14370639-14371638 Setaria italica
Seita.3G190000 2.0kb upstream 2.0kb upstream 3464 true scaffold_3: 14371639-14375102 Setaria italica
Seita.3G190000 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 14373103-14375102 Setaria italica
Seita.3G190000 2.0kb downstream 2.0kb downstream 3464 true scaffold_3: 14369639-14373102 Setaria italica
Seita.3G190000 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 14369639-14371638 Setaria italica
Seita.3G190000 5.0kb upstream 5.0kb upstream 6464 true scaffold_3: 14371639-14378102 Setaria italica
Seita.3G190000 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 14373103-14378102 Setaria italica
Seita.3G190000 5.0kb downstream 5.0kb downstream 6464 true scaffold_3: 14366639-14373102 Setaria italica
Seita.3G190000 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 14366639-14371638 Setaria italica
Seita.3G190000 10.0kb upstream 10.0kb upstream 11464 true scaffold_3: 14371639-14383102 Setaria italica
Seita.3G190000 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 14373103-14383102 Setaria italica
Seita.3G190000 10.0kb downstream 10.0kb downstream 11464 true scaffold_3: 14361639-14373102 Setaria italica
Seita.3G190000 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 14361639-14371638 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029969 5273 Angiosperm View MSA
122189530 5267 Panicoideae View MSA
124585326 5269 Grass View MSA
121299213 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.099        
cufflinks 0.268        
cufflinks 0.017     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.88        
cufflinks 0.562        
cufflinks 6.103       High
cufflinks 5.609       High
cufflinks 9.529       High
cufflinks 0.732        
cufflinks 1.132        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.097        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.047     Low Low
cufflinks 0.135        
cufflinks 0.014     Low Low
cufflinks 0.138        
cufflinks 0.155        
cufflinks 0.106     Low  

0 Strain