Gene : Seita.3G206800 S. italica v2.2
Defline:  (1 of 1) PTHR31045:SF4 - (Z)-GAMMA-BISABOLENE SYNTHASE 1-RELATED Genomic Order:  2068
Name:  ? Seita.3G206800 Secondary Identifier:  ? PAC:32710368
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G206800 0.5kb upstream 0.5kb upstream 3684 true scaffold_3: 16090216-16093899 Setaria italica
Seita.3G206800 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 16090216-16090715 Setaria italica
Seita.3G206800 0.5kb downstream 0.5kb downstream 3684 true scaffold_3: 16090716-16094399 Setaria italica
Seita.3G206800 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 16093900-16094399 Setaria italica
Seita.3G206800 1.0kb upstream 1.0kb upstream 4184 true scaffold_3: 16089716-16093899 Setaria italica
Seita.3G206800 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 16089716-16090715 Setaria italica
Seita.3G206800 1.0kb downstream 1.0kb downstream 4184 true scaffold_3: 16090716-16094899 Setaria italica
Seita.3G206800 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 16093900-16094899 Setaria italica
Seita.3G206800 2.0kb upstream 2.0kb upstream 5184 true scaffold_3: 16088716-16093899 Setaria italica
Seita.3G206800 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 16088716-16090715 Setaria italica
Seita.3G206800 2.0kb downstream 2.0kb downstream 5184 true scaffold_3: 16090716-16095899 Setaria italica
Seita.3G206800 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 16093900-16095899 Setaria italica
Seita.3G206800 5.0kb upstream 5.0kb upstream 8184 true scaffold_3: 16085716-16093899 Setaria italica
Seita.3G206800 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 16085716-16090715 Setaria italica
Seita.3G206800 5.0kb downstream 5.0kb downstream 8184 true scaffold_3: 16090716-16098899 Setaria italica
Seita.3G206800 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 16093900-16098899 Setaria italica
Seita.3G206800 10.0kb upstream 10.0kb upstream 13184 true scaffold_3: 16080716-16093899 Setaria italica
Seita.3G206800 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 16080716-16090715 Setaria italica
Seita.3G206800 10.0kb downstream 10.0kb downstream 13184 true scaffold_3: 16090716-16103899 Setaria italica
Seita.3G206800 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 16093900-16103899 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122180462 5267 Panicoideae View MSA
124582794 5269 Grass View MSA
122046321 5273 Angiosperm View MSA
121349634 5274 Embryophyte View MSA
123381382 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.45     High High
cufflinks 14.765     High  
cufflinks 15.209     High  
cufflinks 13.446     High Low
cufflinks 17.232     High  
cufflinks 15.299     High  
cufflinks 20.164     High  
cufflinks 11.363       Low
cufflinks 16.989     High  
cufflinks 17.468     High  
cufflinks 17.096     High  
cufflinks 29.843     High High
cufflinks 24.741     High High
cufflinks 25.246     High High
cufflinks 23.323     High  
cufflinks 15.335     High  
cufflinks 23.31     High  
cufflinks 21.789     High  
cufflinks 13.877     High Low
cufflinks 23.955     High  

0 Strain