Gene : Seita.3G300300 S. italica v2.2
Defline:  (1 of 1) PTHR23074:SF17 - FIDGETIN-LIKE PROTEIN 1 Genomic Order:  3003
Name:  ? Seita.3G300300 Secondary Identifier:  ? PAC:32710896
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G300300 0.5kb upstream 0.5kb upstream 8270 true scaffold_3: 34276472-34284741 Setaria italica
Seita.3G300300 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 34284242-34284741 Setaria italica
Seita.3G300300 0.5kb downstream 0.5kb downstream 8270 true scaffold_3: 34275972-34284241 Setaria italica
Seita.3G300300 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 34275972-34276471 Setaria italica
Seita.3G300300 1.0kb upstream 1.0kb upstream 8770 true scaffold_3: 34276472-34285241 Setaria italica
Seita.3G300300 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 34284242-34285241 Setaria italica
Seita.3G300300 1.0kb downstream 1.0kb downstream 8770 true scaffold_3: 34275472-34284241 Setaria italica
Seita.3G300300 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 34275472-34276471 Setaria italica
Seita.3G300300 2.0kb upstream 2.0kb upstream 9770 true scaffold_3: 34276472-34286241 Setaria italica
Seita.3G300300 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 34284242-34286241 Setaria italica
Seita.3G300300 2.0kb downstream 2.0kb downstream 9770 true scaffold_3: 34274472-34284241 Setaria italica
Seita.3G300300 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 34274472-34276471 Setaria italica
Seita.3G300300 5.0kb upstream 5.0kb upstream 12770 true scaffold_3: 34276472-34289241 Setaria italica
Seita.3G300300 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 34284242-34289241 Setaria italica
Seita.3G300300 5.0kb downstream 5.0kb downstream 12770 true scaffold_3: 34271472-34284241 Setaria italica
Seita.3G300300 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 34271472-34276471 Setaria italica
Seita.3G300300 10.0kb upstream 10.0kb upstream 17770 true scaffold_3: 34276472-34294241 Setaria italica
Seita.3G300300 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 34284242-34294241 Setaria italica
Seita.3G300300 10.0kb downstream 10.0kb downstream 17770 true scaffold_3: 34266472-34284241 Setaria italica
Seita.3G300300 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 34266472-34276471 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190972 5267 Panicoideae View MSA
124581823 5269 Grass View MSA
122047289 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121345759 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.139        
cufflinks 2.387        
cufflinks 1.182        
cufflinks 1.054        
cufflinks 1.013        
cufflinks 1.995        
cufflinks 1.887        
cufflinks 2.005        
cufflinks 0.95       Low
cufflinks 1.584        
cufflinks 2.549       High
cufflinks 1.089        
cufflinks 0.818       Low
cufflinks 1.398        
cufflinks 1.143        
cufflinks 4.036       High
cufflinks 1.304        
cufflinks 4.464       High
cufflinks 1.006        
cufflinks 0.992        

0 Strain