Gene : Seita.3G335500 S. italica v2.2
Defline:  (1 of 1) PTHR11630:SF26 - DNA REPLICATION LICENSING FACTOR MCM7 Genomic Order:  3355
Name:  ? Seita.3G335500 Secondary Identifier:  ? PAC:32713299
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G335500 0.5kb upstream 0.5kb upstream 5617 true scaffold_3: 42870072-42875688 Setaria italica
Seita.3G335500 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 42870072-42870571 Setaria italica
Seita.3G335500 0.5kb downstream 0.5kb downstream 5617 true scaffold_3: 42870572-42876188 Setaria italica
Seita.3G335500 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 42875689-42876188 Setaria italica
Seita.3G335500 1.0kb upstream 1.0kb upstream 6117 true scaffold_3: 42869572-42875688 Setaria italica
Seita.3G335500 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 42869572-42870571 Setaria italica
Seita.3G335500 1.0kb downstream 1.0kb downstream 6117 true scaffold_3: 42870572-42876688 Setaria italica
Seita.3G335500 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 42875689-42876688 Setaria italica
Seita.3G335500 2.0kb upstream 2.0kb upstream 7117 true scaffold_3: 42868572-42875688 Setaria italica
Seita.3G335500 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 42868572-42870571 Setaria italica
Seita.3G335500 2.0kb downstream 2.0kb downstream 7117 true scaffold_3: 42870572-42877688 Setaria italica
Seita.3G335500 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 42875689-42877688 Setaria italica
Seita.3G335500 5.0kb upstream 5.0kb upstream 10117 true scaffold_3: 42865572-42875688 Setaria italica
Seita.3G335500 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 42865572-42870571 Setaria italica
Seita.3G335500 5.0kb downstream 5.0kb downstream 10117 true scaffold_3: 42870572-42880688 Setaria italica
Seita.3G335500 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 42875689-42880688 Setaria italica
Seita.3G335500 10.0kb upstream 10.0kb upstream 15117 true scaffold_3: 42860572-42875688 Setaria italica
Seita.3G335500 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 42860572-42870571 Setaria italica
Seita.3G335500 10.0kb downstream 10.0kb downstream 15117 true scaffold_3: 42870572-42885688 Setaria italica
Seita.3G335500 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 42875689-42885688 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186364 5267 Panicoideae View MSA
124580600 5269 Grass View MSA
122044774 5273 Angiosperm View MSA
121348758 5274 Embryophyte View MSA
123425028 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.285        
cufflinks 10.761        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.005     Low Low
cufflinks 0.033     Low Low
cufflinks 11.445        
cufflinks 5.918        
cufflinks 6.177        
cufflinks 4.092        
cufflinks 5.571        
cufflinks 8.102        
cufflinks 4.448        
cufflinks 3.954        
cufflinks 0.082     Low Low
cufflinks 8.779        
cufflinks 0.654        
cufflinks 6.368        
cufflinks 0.103       Low
cufflinks 0.137       Low
cufflinks 7.858        

0 Strain