Gene : Seita.3G337800 S. italica v2.2
Defline:  (1 of 6) PF05605 - Drought induced 19 protein (Di19), zinc-binding (zf-Di19) Genomic Order:  3378
Name:  ? Seita.3G337800 Secondary Identifier:  ? PAC:32713543
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G337800 0.5kb upstream 0.5kb upstream 8485 true scaffold_3: 43223416-43231900 Setaria italica
Seita.3G337800 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 43231401-43231900 Setaria italica
Seita.3G337800 0.5kb downstream 0.5kb downstream 8485 true scaffold_3: 43222916-43231400 Setaria italica
Seita.3G337800 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 43222916-43223415 Setaria italica
Seita.3G337800 1.0kb upstream 1.0kb upstream 8985 true scaffold_3: 43223416-43232400 Setaria italica
Seita.3G337800 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 43231401-43232400 Setaria italica
Seita.3G337800 1.0kb downstream 1.0kb downstream 8985 true scaffold_3: 43222416-43231400 Setaria italica
Seita.3G337800 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 43222416-43223415 Setaria italica
Seita.3G337800 2.0kb upstream 2.0kb upstream 9985 true scaffold_3: 43223416-43233400 Setaria italica
Seita.3G337800 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 43231401-43233400 Setaria italica
Seita.3G337800 2.0kb downstream 2.0kb downstream 9985 true scaffold_3: 43221416-43231400 Setaria italica
Seita.3G337800 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 43221416-43223415 Setaria italica
Seita.3G337800 5.0kb upstream 5.0kb upstream 12985 true scaffold_3: 43223416-43236400 Setaria italica
Seita.3G337800 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 43231401-43236400 Setaria italica
Seita.3G337800 5.0kb downstream 5.0kb downstream 12985 true scaffold_3: 43218416-43231400 Setaria italica
Seita.3G337800 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 43218416-43223415 Setaria italica
Seita.3G337800 10.0kb upstream 10.0kb upstream 17985 true scaffold_3: 43223416-43241400 Setaria italica
Seita.3G337800 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 43231401-43241400 Setaria italica
Seita.3G337800 10.0kb downstream 10.0kb downstream 17985 true scaffold_3: 43213416-43231400 Setaria italica
Seita.3G337800 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 43213416-43223415 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122177997 5267 Panicoideae View MSA
124583906 5269 Grass View MSA
122043196 5273 Angiosperm View MSA
121347850 5274 Embryophyte View MSA
123380651 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.904       Low
cufflinks 3.921        
cufflinks 5.072        
cufflinks 5.052        
cufflinks 4.517        
cufflinks 4.337        
cufflinks 3.525        
cufflinks 5.858       High
cufflinks 3.204        
cufflinks 3.434        
cufflinks 3.031       Low
cufflinks 7.405       High
cufflinks 2.718       Low
cufflinks 5.042        
cufflinks 3.093        
cufflinks 4.976        
cufflinks 3.292        
cufflinks 9.421       High
cufflinks 4.347        
cufflinks 3.505        

0 Strain