Gene : Seita.3G263000 S. italica v2.2
Defline:  (1 of 1) PTHR20863//PTHR20863:SF30 - ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED Genomic Order:  2630
Name:  ? Seita.3G263000 Secondary Identifier:  ? PAC:32713412
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G263000 0.5kb upstream 0.5kb upstream 2498 true scaffold_3: 23040669-23043166 Setaria italica
Seita.3G263000 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 23040669-23041168 Setaria italica
Seita.3G263000 0.5kb downstream 0.5kb downstream 2498 true scaffold_3: 23041169-23043666 Setaria italica
Seita.3G263000 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 23043167-23043666 Setaria italica
Seita.3G263000 1.0kb upstream 1.0kb upstream 2998 true scaffold_3: 23040169-23043166 Setaria italica
Seita.3G263000 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 23040169-23041168 Setaria italica
Seita.3G263000 1.0kb downstream 1.0kb downstream 2998 true scaffold_3: 23041169-23044166 Setaria italica
Seita.3G263000 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 23043167-23044166 Setaria italica
Seita.3G263000 2.0kb upstream 2.0kb upstream 3998 true scaffold_3: 23039169-23043166 Setaria italica
Seita.3G263000 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 23039169-23041168 Setaria italica
Seita.3G263000 2.0kb downstream 2.0kb downstream 3998 true scaffold_3: 23041169-23045166 Setaria italica
Seita.3G263000 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 23043167-23045166 Setaria italica
Seita.3G263000 5.0kb upstream 5.0kb upstream 6998 true scaffold_3: 23036169-23043166 Setaria italica
Seita.3G263000 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 23036169-23041168 Setaria italica
Seita.3G263000 5.0kb downstream 5.0kb downstream 6998 true scaffold_3: 23041169-23048166 Setaria italica
Seita.3G263000 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 23043167-23048166 Setaria italica
Seita.3G263000 10.0kb upstream 10.0kb upstream 11998 true scaffold_3: 23031169-23043166 Setaria italica
Seita.3G263000 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 23031169-23041168 Setaria italica
Seita.3G263000 10.0kb downstream 10.0kb downstream 11998 true scaffold_3: 23041169-23053166 Setaria italica
Seita.3G263000 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 23043167-23053166 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185274 5267 Panicoideae View MSA
124589265 5269 Grass View MSA
122046821 5273 Angiosperm View MSA
121348807 5274 Embryophyte View MSA
123423791 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.337        
cufflinks 20.583     High  
cufflinks 6.021       Low
cufflinks 5.717       Low
cufflinks 5.604       Low
cufflinks 18.509     High  
cufflinks 8.837        
cufflinks 26.726     High High
cufflinks 14.785     High  
cufflinks 38.238     High High
cufflinks 12.664        
cufflinks 19.96     High  
cufflinks 15.723     High  
cufflinks 14.437     High  
cufflinks 18.244     High  
cufflinks 4.306       Low
cufflinks 31.157     High High
cufflinks 4.172       Low
cufflinks 5.208       Low
cufflinks 28.804     High High

0 Strain