Gene : Seita.3G260600 S. italica v2.2
Defline:  (1 of 1) PTHR10502//PTHR10502:SF124 - ANNEXIN Genomic Order:  2606
Name:  ? Seita.3G260600 Secondary Identifier:  ? PAC:32713637
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G260600 0.5kb upstream 0.5kb upstream 2834 true scaffold_3: 22655044-22657877 Setaria italica
Seita.3G260600 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 22655044-22655543 Setaria italica
Seita.3G260600 0.5kb downstream 0.5kb downstream 2834 true scaffold_3: 22655544-22658377 Setaria italica
Seita.3G260600 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 22657878-22658377 Setaria italica
Seita.3G260600 1.0kb upstream 1.0kb upstream 3334 true scaffold_3: 22654544-22657877 Setaria italica
Seita.3G260600 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 22654544-22655543 Setaria italica
Seita.3G260600 1.0kb downstream 1.0kb downstream 3334 true scaffold_3: 22655544-22658877 Setaria italica
Seita.3G260600 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 22657878-22658877 Setaria italica
Seita.3G260600 2.0kb upstream 2.0kb upstream 4334 true scaffold_3: 22653544-22657877 Setaria italica
Seita.3G260600 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 22653544-22655543 Setaria italica
Seita.3G260600 2.0kb downstream 2.0kb downstream 4334 true scaffold_3: 22655544-22659877 Setaria italica
Seita.3G260600 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 22657878-22659877 Setaria italica
Seita.3G260600 5.0kb upstream 5.0kb upstream 7334 true scaffold_3: 22650544-22657877 Setaria italica
Seita.3G260600 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 22650544-22655543 Setaria italica
Seita.3G260600 5.0kb downstream 5.0kb downstream 7334 true scaffold_3: 22655544-22662877 Setaria italica
Seita.3G260600 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 22657878-22662877 Setaria italica
Seita.3G260600 10.0kb upstream 10.0kb upstream 12334 true scaffold_3: 22645544-22657877 Setaria italica
Seita.3G260600 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 22645544-22655543 Setaria italica
Seita.3G260600 10.0kb downstream 10.0kb downstream 12334 true scaffold_3: 22655544-22667877 Setaria italica
Seita.3G260600 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 22657878-22667877 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026387 5273 Angiosperm View MSA
122189672 5267 Panicoideae View MSA
124589846 5269 Grass View MSA
121296305 5274 Embryophyte View MSA
123334492 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.591     High  
cufflinks 78.827     High  
cufflinks 0.318       Low
cufflinks 0.254       Low
cufflinks 1.573       Low
cufflinks 66.597     High  
cufflinks 9.698        
cufflinks 27.644     High  
cufflinks 17.695     High  
cufflinks 151.031     High High
cufflinks 119.429     High High
cufflinks 25.213     High  
cufflinks 68.164     High  
cufflinks 1.958        
cufflinks 21.623     High  
cufflinks 5.147        
cufflinks 34.284     High  
cufflinks 2.164        
cufflinks 1.257       Low
cufflinks 48.986     High  

0 Strain