Gene : Seita.3G280100 S. italica v2.2
Defline:  (1 of 1) 3.2.1.96 - Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase / Endo-beta-N-acetylglucosaminidase Genomic Order:  2801
Name:  ? Seita.3G280100 Secondary Identifier:  ? PAC:32712052
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G280100 0.5kb upstream 0.5kb upstream 6310 true scaffold_3: 25825903-25832212 Setaria italica
Seita.3G280100 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 25825903-25826402 Setaria italica
Seita.3G280100 0.5kb downstream 0.5kb downstream 6310 true scaffold_3: 25826403-25832712 Setaria italica
Seita.3G280100 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 25832213-25832712 Setaria italica
Seita.3G280100 1.0kb upstream 1.0kb upstream 6810 true scaffold_3: 25825403-25832212 Setaria italica
Seita.3G280100 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 25825403-25826402 Setaria italica
Seita.3G280100 1.0kb downstream 1.0kb downstream 6810 true scaffold_3: 25826403-25833212 Setaria italica
Seita.3G280100 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 25832213-25833212 Setaria italica
Seita.3G280100 2.0kb upstream 2.0kb upstream 7810 true scaffold_3: 25824403-25832212 Setaria italica
Seita.3G280100 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 25824403-25826402 Setaria italica
Seita.3G280100 2.0kb downstream 2.0kb downstream 7810 true scaffold_3: 25826403-25834212 Setaria italica
Seita.3G280100 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 25832213-25834212 Setaria italica
Seita.3G280100 5.0kb upstream 5.0kb upstream 10810 true scaffold_3: 25821403-25832212 Setaria italica
Seita.3G280100 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 25821403-25826402 Setaria italica
Seita.3G280100 5.0kb downstream 5.0kb downstream 10810 true scaffold_3: 25826403-25837212 Setaria italica
Seita.3G280100 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 25832213-25837212 Setaria italica
Seita.3G280100 10.0kb upstream 10.0kb upstream 15810 true scaffold_3: 25816403-25832212 Setaria italica
Seita.3G280100 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 25816403-25826402 Setaria italica
Seita.3G280100 10.0kb downstream 10.0kb downstream 15810 true scaffold_3: 25826403-25842212 Setaria italica
Seita.3G280100 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 25832213-25842212 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122176574 5267 Panicoideae View MSA
124588417 5269 Grass View MSA
122042882 5273 Angiosperm View MSA
121344799 5274 Embryophyte View MSA
123426300 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.483        
cufflinks 2.354        
cufflinks 2.257        
cufflinks 1.534       Low
cufflinks 1.826       Low
cufflinks 2.416        
cufflinks 3.069        
cufflinks 2.689        
cufflinks 2.262        
cufflinks 4.669        
cufflinks 4.082        
cufflinks 6.186       High
cufflinks 4.781        
cufflinks 2.351        
cufflinks 6.33       High
cufflinks 2.428        
cufflinks 7.127       High
cufflinks 3.291        
cufflinks 1.504       Low
cufflinks 5.621       High

0 Strain