Gene : Seita.3G282600 S. italica v2.2
Defline:  (1 of 1) PTHR24073:SF509 - RAS-RELATED PROTEIN RAB-21 Genomic Order:  2826
Name:  ? Seita.3G282600 Secondary Identifier:  ? PAC:32710468
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G282600 0.5kb upstream 0.5kb upstream 4405 true scaffold_3: 26467216-26471620 Setaria italica
Seita.3G282600 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 26467216-26467715 Setaria italica
Seita.3G282600 0.5kb downstream 0.5kb downstream 4405 true scaffold_3: 26467716-26472120 Setaria italica
Seita.3G282600 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 26471621-26472120 Setaria italica
Seita.3G282600 1.0kb upstream 1.0kb upstream 4905 true scaffold_3: 26466716-26471620 Setaria italica
Seita.3G282600 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 26466716-26467715 Setaria italica
Seita.3G282600 1.0kb downstream 1.0kb downstream 4905 true scaffold_3: 26467716-26472620 Setaria italica
Seita.3G282600 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 26471621-26472620 Setaria italica
Seita.3G282600 2.0kb upstream 2.0kb upstream 5905 true scaffold_3: 26465716-26471620 Setaria italica
Seita.3G282600 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 26465716-26467715 Setaria italica
Seita.3G282600 2.0kb downstream 2.0kb downstream 5905 true scaffold_3: 26467716-26473620 Setaria italica
Seita.3G282600 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 26471621-26473620 Setaria italica
Seita.3G282600 5.0kb upstream 5.0kb upstream 8905 true scaffold_3: 26462716-26471620 Setaria italica
Seita.3G282600 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 26462716-26467715 Setaria italica
Seita.3G282600 5.0kb downstream 5.0kb downstream 8905 true scaffold_3: 26467716-26476620 Setaria italica
Seita.3G282600 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 26471621-26476620 Setaria italica
Seita.3G282600 10.0kb upstream 10.0kb upstream 13905 true scaffold_3: 26457716-26471620 Setaria italica
Seita.3G282600 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 26457716-26467715 Setaria italica
Seita.3G282600 10.0kb downstream 10.0kb downstream 13905 true scaffold_3: 26467716-26481620 Setaria italica
Seita.3G282600 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 26471621-26481620 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181765 5267 Panicoideae View MSA
124588192 5269 Grass View MSA
122050423 5273 Angiosperm View MSA
121350094 5274 Embryophyte View MSA
123426834 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.122        
cufflinks 3.825        
cufflinks 2.874        
cufflinks 2.888        
cufflinks 2.225       Low
cufflinks 3.933        
cufflinks 1.958       Low
cufflinks 4.391       High
cufflinks 1.842       Low
cufflinks 4.818       High
cufflinks 3.162        
cufflinks 3.644        
cufflinks 4.3       High
cufflinks 3.178        
cufflinks 4.222        
cufflinks 2.048       Low
cufflinks 3.939        
cufflinks 3.117        
cufflinks 3.219        
cufflinks 3.596        

0 Strain