Gene : Seita.3G406800 S. italica v2.2
Defline:  (1 of 1) PTHR10617//PTHR10617:SF103 - ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE Genomic Order:  4068
Name:  ? Seita.3G406800 Secondary Identifier:  ? PAC:32712015
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G406800 0.5kb upstream 0.5kb upstream 4426 true scaffold_3: 50494678-50499103 Setaria italica
Seita.3G406800 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 50494678-50495177 Setaria italica
Seita.3G406800 0.5kb downstream 0.5kb downstream 4426 true scaffold_3: 50495178-50499603 Setaria italica
Seita.3G406800 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 50499104-50499603 Setaria italica
Seita.3G406800 1.0kb upstream 1.0kb upstream 4926 true scaffold_3: 50494178-50499103 Setaria italica
Seita.3G406800 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 50494178-50495177 Setaria italica
Seita.3G406800 1.0kb downstream 1.0kb downstream 4926 true scaffold_3: 50495178-50500103 Setaria italica
Seita.3G406800 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 50499104-50500103 Setaria italica
Seita.3G406800 2.0kb upstream 2.0kb upstream 5926 true scaffold_3: 50493178-50499103 Setaria italica
Seita.3G406800 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 50493178-50495177 Setaria italica
Seita.3G406800 2.0kb downstream 2.0kb downstream 5926 true scaffold_3: 50495178-50501103 Setaria italica
Seita.3G406800 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 50499104-50501103 Setaria italica
Seita.3G406800 5.0kb upstream 5.0kb upstream 8926 true scaffold_3: 50490178-50499103 Setaria italica
Seita.3G406800 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 50490178-50495177 Setaria italica
Seita.3G406800 5.0kb downstream 5.0kb downstream 8926 true scaffold_3: 50495178-50504103 Setaria italica
Seita.3G406800 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 50499104-50504103 Setaria italica
Seita.3G406800 10.0kb upstream 10.0kb upstream 13926 true scaffold_3: 50485178-50499103 Setaria italica
Seita.3G406800 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 50485178-50495177 Setaria italica
Seita.3G406800 10.0kb downstream 10.0kb downstream 13926 true scaffold_3: 50495178-50509103 Setaria italica
Seita.3G406800 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 50499104-50509103 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183860 5267 Panicoideae View MSA
124575970 5269 Grass View MSA
122045764 5273 Angiosperm View MSA
121343971 5274 Embryophyte View MSA
123423884 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.455        
cufflinks 7.08        
cufflinks 9.305        
cufflinks 8.35        
cufflinks 8.2        
cufflinks 7.439        
cufflinks 8.449        
cufflinks 11.493       High
cufflinks 11.573       High
cufflinks 2.57       Low
cufflinks 4.996        
cufflinks 2.908       Low
cufflinks 3.165       Low
cufflinks 8.304        
cufflinks 2.44       Low
cufflinks 9.356        
cufflinks 3.136       Low
cufflinks 8.018        
cufflinks 6.366        
cufflinks 3.845        

0 Strain