Gene : Seita.4G009100 S. italica v2.2
Defline:  (1 of 1) PTHR10825//PTHR10825:SF26 - RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT Genomic Order:  91
Name:  ? Seita.4G009100 Secondary Identifier:  ? PAC:32708918
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G009100 0.5kb upstream 0.5kb upstream 1895 true scaffold_4: 594268-596162 Setaria italica
Seita.4G009100 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 595663-596162 Setaria italica
Seita.4G009100 0.5kb downstream 0.5kb downstream 1895 true scaffold_4: 593768-595662 Setaria italica
Seita.4G009100 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 593768-594267 Setaria italica
Seita.4G009100 1.0kb upstream 1.0kb upstream 2395 true scaffold_4: 594268-596662 Setaria italica
Seita.4G009100 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 595663-596662 Setaria italica
Seita.4G009100 1.0kb downstream 1.0kb downstream 2395 true scaffold_4: 593268-595662 Setaria italica
Seita.4G009100 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 593268-594267 Setaria italica
Seita.4G009100 2.0kb upstream 2.0kb upstream 3395 true scaffold_4: 594268-597662 Setaria italica
Seita.4G009100 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 595663-597662 Setaria italica
Seita.4G009100 2.0kb downstream 2.0kb downstream 3395 true scaffold_4: 592268-595662 Setaria italica
Seita.4G009100 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 592268-594267 Setaria italica
Seita.4G009100 5.0kb upstream 5.0kb upstream 6395 true scaffold_4: 594268-600662 Setaria italica
Seita.4G009100 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 595663-600662 Setaria italica
Seita.4G009100 5.0kb downstream 5.0kb downstream 6395 true scaffold_4: 589268-595662 Setaria italica
Seita.4G009100 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 589268-594267 Setaria italica
Seita.4G009100 10.0kb upstream 10.0kb upstream 11395 true scaffold_4: 594268-605662 Setaria italica
Seita.4G009100 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 595663-605662 Setaria italica
Seita.4G009100 10.0kb downstream 10.0kb downstream 11395 true scaffold_4: 584268-595662 Setaria italica
Seita.4G009100 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 584268-594267 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190784 5267 Panicoideae View MSA
124572519 5269 Grass View MSA
122049409 5273 Angiosperm View MSA
121311385 5274 Embryophyte View MSA
123348689 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.197        
cufflinks 5.146       High
cufflinks 1.536        
cufflinks 1.23       Low
cufflinks 1.126       Low
cufflinks 4.621       High
cufflinks 2.189        
cufflinks 1.873        
cufflinks 1.216       Low
cufflinks 1.423        
cufflinks 2.39        
cufflinks 2.987        
cufflinks 1.728        
cufflinks 2.083        
cufflinks 2.484        
cufflinks 2.366        
cufflinks 2.913        
cufflinks 3.499       High
cufflinks 0.988       Low
cufflinks 2.63        

0 Strain