Gene : Seita.4G011800 S. italica v2.2
Defline:  (1 of 3) PTHR23310//PTHR23310:SF67 - ACYL-COA-BINDING PROTEIN, ACBP Genomic Order:  118
Name:  ? Seita.4G011800 Secondary Identifier:  ? PAC:32707422
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G011800 0.5kb upstream 0.5kb upstream 2932 true scaffold_4: 747326-750257 Setaria italica
Seita.4G011800 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 749758-750257 Setaria italica
Seita.4G011800 0.5kb downstream 0.5kb downstream 2932 true scaffold_4: 746826-749757 Setaria italica
Seita.4G011800 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 746826-747325 Setaria italica
Seita.4G011800 1.0kb upstream 1.0kb upstream 3432 true scaffold_4: 747326-750757 Setaria italica
Seita.4G011800 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 749758-750757 Setaria italica
Seita.4G011800 1.0kb downstream 1.0kb downstream 3432 true scaffold_4: 746326-749757 Setaria italica
Seita.4G011800 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 746326-747325 Setaria italica
Seita.4G011800 2.0kb upstream 2.0kb upstream 4432 true scaffold_4: 747326-751757 Setaria italica
Seita.4G011800 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 749758-751757 Setaria italica
Seita.4G011800 2.0kb downstream 2.0kb downstream 4432 true scaffold_4: 745326-749757 Setaria italica
Seita.4G011800 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 745326-747325 Setaria italica
Seita.4G011800 5.0kb upstream 5.0kb upstream 7432 true scaffold_4: 747326-754757 Setaria italica
Seita.4G011800 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 749758-754757 Setaria italica
Seita.4G011800 5.0kb downstream 5.0kb downstream 7432 true scaffold_4: 742326-749757 Setaria italica
Seita.4G011800 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 742326-747325 Setaria italica
Seita.4G011800 10.0kb upstream 10.0kb upstream 12432 true scaffold_4: 747326-759757 Setaria italica
Seita.4G011800 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 749758-759757 Setaria italica
Seita.4G011800 10.0kb downstream 10.0kb downstream 12432 true scaffold_4: 737326-749757 Setaria italica
Seita.4G011800 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 737326-747325 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181799 5267 Panicoideae View MSA
124584246 5269 Grass View MSA
122043640 5273 Angiosperm View MSA
121350915 5274 Embryophyte View MSA
123427551 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 42.258     High  
cufflinks 52.178     High  
cufflinks 68.706     High  
cufflinks 71.504     High  
cufflinks 46.734     High  
cufflinks 52.181     High  
cufflinks 49.885     High  
cufflinks 55.641     High  
cufflinks 43.831     High  
cufflinks 45.849     High  
cufflinks 40.477     High Low
cufflinks 63.647     High  
cufflinks 82.968     High High
cufflinks 110.788     High High
cufflinks 40.685     High Low
cufflinks 37.056     High Low
cufflinks 62.718     High  
cufflinks 40.774     High  
cufflinks 106.777     High High
cufflinks 59.996     High  

0 Strain