Gene : Seita.4G012900 S. italica v2.2
Defline:  (1 of 1) 4.3.1.4 - Formimidoyltetrahydrofolate cyclodeaminase / Formiminotetrahydrofolate cyclodeaminase Genomic Order:  129
Name:  ? Seita.4G012900 Secondary Identifier:  ? PAC:32707464
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G012900 0.5kb upstream 0.5kb upstream 2327 true scaffold_4: 802862-805188 Setaria italica
Seita.4G012900 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 804689-805188 Setaria italica
Seita.4G012900 0.5kb downstream 0.5kb downstream 2327 true scaffold_4: 802362-804688 Setaria italica
Seita.4G012900 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 802362-802861 Setaria italica
Seita.4G012900 1.0kb upstream 1.0kb upstream 2827 true scaffold_4: 802862-805688 Setaria italica
Seita.4G012900 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 804689-805688 Setaria italica
Seita.4G012900 1.0kb downstream 1.0kb downstream 2827 true scaffold_4: 801862-804688 Setaria italica
Seita.4G012900 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 801862-802861 Setaria italica
Seita.4G012900 2.0kb upstream 2.0kb upstream 3827 true scaffold_4: 802862-806688 Setaria italica
Seita.4G012900 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 804689-806688 Setaria italica
Seita.4G012900 2.0kb downstream 2.0kb downstream 3827 true scaffold_4: 800862-804688 Setaria italica
Seita.4G012900 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 800862-802861 Setaria italica
Seita.4G012900 5.0kb upstream 5.0kb upstream 6827 true scaffold_4: 802862-809688 Setaria italica
Seita.4G012900 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 804689-809688 Setaria italica
Seita.4G012900 5.0kb downstream 5.0kb downstream 6827 true scaffold_4: 797862-804688 Setaria italica
Seita.4G012900 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 797862-802861 Setaria italica
Seita.4G012900 10.0kb upstream 10.0kb upstream 11827 true scaffold_4: 802862-814688 Setaria italica
Seita.4G012900 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 804689-814688 Setaria italica
Seita.4G012900 10.0kb downstream 10.0kb downstream 11827 true scaffold_4: 792862-804688 Setaria italica
Seita.4G012900 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 792862-802861 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188940 5267 Panicoideae View MSA
124573707 5269 Grass View MSA
122048049 5273 Angiosperm View MSA
121344000 5274 Embryophyte View MSA
123424939 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.232        
cufflinks 0.526       High
cufflinks 0.252        
cufflinks 0.178       Low
cufflinks 0.195       Low
cufflinks 0.765       High
cufflinks 0.495        
cufflinks 0.662       High
cufflinks 0.283        
cufflinks 0.527       High
cufflinks 0.171       Low
cufflinks 0.226        
cufflinks 0.292        
cufflinks 0.302        
cufflinks 0.278        
cufflinks 0.486        
cufflinks 0.375        
cufflinks 0.17       Low
cufflinks 0.528       High
cufflinks 0.264        

0 Strain