Gene : Seita.4G013300 S. italica v2.2
Genomic Order:  133 Name:  ? Seita.4G013300
Secondary Identifier:  ? PAC:32709579
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G013300 0.5kb upstream 0.5kb upstream 1424 true scaffold_4: 831532-832955 Setaria italica
Seita.4G013300 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 831532-832031 Setaria italica
Seita.4G013300 0.5kb downstream 0.5kb downstream 1424 true scaffold_4: 832032-833455 Setaria italica
Seita.4G013300 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 832956-833455 Setaria italica
Seita.4G013300 1.0kb upstream 1.0kb upstream 1924 true scaffold_4: 831032-832955 Setaria italica
Seita.4G013300 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 831032-832031 Setaria italica
Seita.4G013300 1.0kb downstream 1.0kb downstream 1924 true scaffold_4: 832032-833955 Setaria italica
Seita.4G013300 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 832956-833955 Setaria italica
Seita.4G013300 2.0kb upstream 2.0kb upstream 2924 true scaffold_4: 830032-832955 Setaria italica
Seita.4G013300 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 830032-832031 Setaria italica
Seita.4G013300 2.0kb downstream 2.0kb downstream 2924 true scaffold_4: 832032-834955 Setaria italica
Seita.4G013300 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 832956-834955 Setaria italica
Seita.4G013300 5.0kb upstream 5.0kb upstream 5924 true scaffold_4: 827032-832955 Setaria italica
Seita.4G013300 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 827032-832031 Setaria italica
Seita.4G013300 5.0kb downstream 5.0kb downstream 5924 true scaffold_4: 832032-837955 Setaria italica
Seita.4G013300 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 832956-837955 Setaria italica
Seita.4G013300 10.0kb upstream 10.0kb upstream 10924 true scaffold_4: 822032-832955 Setaria italica
Seita.4G013300 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 822032-832031 Setaria italica
Seita.4G013300 10.0kb downstream 10.0kb downstream 10924 true scaffold_4: 832032-842955 Setaria italica
Seita.4G013300 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 832956-842955 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121994917 5273 Angiosperm View MSA
122198763 5267 Panicoideae View MSA
124586142 5269 Grass View MSA
121265126 5274 Embryophyte View MSA
123303531 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.548        
cufflinks 10.407        
cufflinks 1.716        
cufflinks 0.871        
cufflinks 1.698        
cufflinks 17.353     High  
cufflinks 20.237     High  
cufflinks 14.434     High  
cufflinks 17.605     High  
cufflinks 6.19        
cufflinks 6.319        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.036     Low Low
cufflinks 7.45        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 17.128     High  
cufflinks 0.16       Low
cufflinks 5.006        
cufflinks 1.865        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain