Gene : Seita.4G012700 S. italica v2.2
Defline:  (1 of 1) PTHR12136//PTHR12136:SF63 - STEROIDOGENIC ACUTE REGULATORY PROTEIN STAR Genomic Order:  127
Name:  ? Seita.4G012700 Secondary Identifier:  ? PAC:32706463
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G012700 0.5kb upstream 0.5kb upstream 8775 true scaffold_4: 788521-797295 Setaria italica
Seita.4G012700 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 788521-789020 Setaria italica
Seita.4G012700 0.5kb downstream 0.5kb downstream 8775 true scaffold_4: 789021-797795 Setaria italica
Seita.4G012700 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 797296-797795 Setaria italica
Seita.4G012700 1.0kb upstream 1.0kb upstream 9275 true scaffold_4: 788021-797295 Setaria italica
Seita.4G012700 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 788021-789020 Setaria italica
Seita.4G012700 1.0kb downstream 1.0kb downstream 9275 true scaffold_4: 789021-798295 Setaria italica
Seita.4G012700 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 797296-798295 Setaria italica
Seita.4G012700 2.0kb upstream 2.0kb upstream 10275 true scaffold_4: 787021-797295 Setaria italica
Seita.4G012700 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 787021-789020 Setaria italica
Seita.4G012700 2.0kb downstream 2.0kb downstream 10275 true scaffold_4: 789021-799295 Setaria italica
Seita.4G012700 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 797296-799295 Setaria italica
Seita.4G012700 5.0kb upstream 5.0kb upstream 13275 true scaffold_4: 784021-797295 Setaria italica
Seita.4G012700 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 784021-789020 Setaria italica
Seita.4G012700 5.0kb downstream 5.0kb downstream 13275 true scaffold_4: 789021-802295 Setaria italica
Seita.4G012700 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 797296-802295 Setaria italica
Seita.4G012700 10.0kb upstream 10.0kb upstream 18275 true scaffold_4: 779021-797295 Setaria italica
Seita.4G012700 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 779021-789020 Setaria italica
Seita.4G012700 10.0kb downstream 10.0kb downstream 18275 true scaffold_4: 789021-807295 Setaria italica
Seita.4G012700 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 797296-807295 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179430 5267 Panicoideae View MSA
124582068 5269 Grass View MSA
122042649 5273 Angiosperm View MSA
121346561 5274 Embryophyte View MSA
123428121 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.045        
cufflinks 2.994       Low
cufflinks 6.989        
cufflinks 6.884        
cufflinks 5.067        
cufflinks 2.965       Low
cufflinks 5.418        
cufflinks 3.693       Low
cufflinks 3.325       Low
cufflinks 3.627       Low
cufflinks 5.468        
cufflinks 10.586       High
cufflinks 6.617        
cufflinks 6.293        
cufflinks 7.883        
cufflinks 5.907        
cufflinks 8.092       High
cufflinks 5.607        
cufflinks 6.61        
cufflinks 9.582       High

0 Strain