Gene : Seita.3G365700 S. italica v2.2
Defline:  (1 of 2) PTHR11785//PTHR11785:SF366 - AMINO ACID TRANSPORTER Genomic Order:  3657
Name:  ? Seita.3G365700 Secondary Identifier:  ? PAC:32713573
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G365700 0.5kb upstream 0.5kb upstream 2349 true scaffold_3: 46918846-46921194 Setaria italica
Seita.3G365700 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 46918846-46919345 Setaria italica
Seita.3G365700 0.5kb downstream 0.5kb downstream 2349 true scaffold_3: 46919346-46921694 Setaria italica
Seita.3G365700 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 46921195-46921694 Setaria italica
Seita.3G365700 1.0kb upstream 1.0kb upstream 2849 true scaffold_3: 46918346-46921194 Setaria italica
Seita.3G365700 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 46918346-46919345 Setaria italica
Seita.3G365700 1.0kb downstream 1.0kb downstream 2849 true scaffold_3: 46919346-46922194 Setaria italica
Seita.3G365700 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 46921195-46922194 Setaria italica
Seita.3G365700 2.0kb upstream 2.0kb upstream 3849 true scaffold_3: 46917346-46921194 Setaria italica
Seita.3G365700 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 46917346-46919345 Setaria italica
Seita.3G365700 2.0kb downstream 2.0kb downstream 3849 true scaffold_3: 46919346-46923194 Setaria italica
Seita.3G365700 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 46921195-46923194 Setaria italica
Seita.3G365700 5.0kb upstream 5.0kb upstream 6849 true scaffold_3: 46914346-46921194 Setaria italica
Seita.3G365700 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 46914346-46919345 Setaria italica
Seita.3G365700 5.0kb downstream 5.0kb downstream 6849 true scaffold_3: 46919346-46926194 Setaria italica
Seita.3G365700 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 46921195-46926194 Setaria italica
Seita.3G365700 10.0kb upstream 10.0kb upstream 11849 true scaffold_3: 46909346-46921194 Setaria italica
Seita.3G365700 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 46909346-46919345 Setaria italica
Seita.3G365700 10.0kb downstream 10.0kb downstream 11849 true scaffold_3: 46919346-46931194 Setaria italica
Seita.3G365700 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 46921195-46931194 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188994 5267 Panicoideae View MSA
124579195 5269 Grass View MSA
122042017 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.333        
cufflinks 4.907        
cufflinks 9.39        
cufflinks 10.743        
cufflinks 6.771        
cufflinks 6.821        
cufflinks 2.859       Low
cufflinks 7.147        
cufflinks 3.439        
cufflinks 22.133     High High
cufflinks 7.261        
cufflinks 4.201        
cufflinks 8.111        
cufflinks 27.708     High High
cufflinks 6.535        
cufflinks 2.103       Low
cufflinks 6.571        
cufflinks 1.298       Low
cufflinks 3.372        
cufflinks 9.157        

0 Strain