Gene : Seita.3G372900 S. italica v2.2
Genomic Order:  3729 Name:  ? Seita.3G372900
Secondary Identifier:  ? PAC:32713404
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.3G372900 0.5kb upstream 0.5kb upstream 1683 true scaffold_3: 47664111-47665793 Setaria italica
Seita.3G372900 0.5kb upstream 0.5kb upstream 500 false scaffold_3: 47665294-47665793 Setaria italica
Seita.3G372900 0.5kb downstream 0.5kb downstream 1683 true scaffold_3: 47663611-47665293 Setaria italica
Seita.3G372900 0.5kb downstream 0.5kb downstream 500 false scaffold_3: 47663611-47664110 Setaria italica
Seita.3G372900 1.0kb upstream 1.0kb upstream 2183 true scaffold_3: 47664111-47666293 Setaria italica
Seita.3G372900 1.0kb upstream 1.0kb upstream 1000 false scaffold_3: 47665294-47666293 Setaria italica
Seita.3G372900 1.0kb downstream 1.0kb downstream 2183 true scaffold_3: 47663111-47665293 Setaria italica
Seita.3G372900 1.0kb downstream 1.0kb downstream 1000 false scaffold_3: 47663111-47664110 Setaria italica
Seita.3G372900 2.0kb upstream 2.0kb upstream 3183 true scaffold_3: 47664111-47667293 Setaria italica
Seita.3G372900 2.0kb upstream 2.0kb upstream 2000 false scaffold_3: 47665294-47667293 Setaria italica
Seita.3G372900 2.0kb downstream 2.0kb downstream 3183 true scaffold_3: 47662111-47665293 Setaria italica
Seita.3G372900 2.0kb downstream 2.0kb downstream 2000 false scaffold_3: 47662111-47664110 Setaria italica
Seita.3G372900 5.0kb upstream 5.0kb upstream 6183 true scaffold_3: 47664111-47670293 Setaria italica
Seita.3G372900 5.0kb upstream 5.0kb upstream 5000 false scaffold_3: 47665294-47670293 Setaria italica
Seita.3G372900 5.0kb downstream 5.0kb downstream 6183 true scaffold_3: 47659111-47665293 Setaria italica
Seita.3G372900 5.0kb downstream 5.0kb downstream 5000 false scaffold_3: 47659111-47664110 Setaria italica
Seita.3G372900 10.0kb upstream 10.0kb upstream 11183 true scaffold_3: 47664111-47675293 Setaria italica
Seita.3G372900 10.0kb upstream 10.0kb upstream 10000 false scaffold_3: 47665294-47675293 Setaria italica
Seita.3G372900 10.0kb downstream 10.0kb downstream 11183 true scaffold_3: 47654111-47665293 Setaria italica
Seita.3G372900 10.0kb downstream 10.0kb downstream 10000 false scaffold_3: 47654111-47664110 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122196717 5267 Panicoideae View MSA
124588840 5269 Grass View MSA
122048539 5273 Angiosperm View MSA
121350224 5274 Embryophyte View MSA
123381631 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.178        
cufflinks 0.416        
cufflinks 0.14        
cufflinks 0.092        
cufflinks 0.142        
cufflinks 0.349        
cufflinks 0.289        
cufflinks 0.536        
cufflinks 0.374        
cufflinks 1.989       High
cufflinks 0.313        
cufflinks 0.377        
cufflinks 0.224        
cufflinks 0.628        
cufflinks 0.328        
cufflinks 0.083     Low Low
cufflinks 0.502        
cufflinks 0.015     Low Low
cufflinks 0.064     Low Low
cufflinks 0.531        

0 Strain