Gene : Seita.4G058000 S. italica v2.2
Defline:  (1 of 2) 2.8.1.11 - Molybdopterin-synthase sulfurtransferase / Molybdopterin synthase sulfurylase Genomic Order:  580
Name:  ? Seita.4G058000 Secondary Identifier:  ? PAC:32707653
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Sitalica PWY-6823 Setaria italica pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G058000 0.5kb upstream 0.5kb upstream 5698 true scaffold_4: 4298902-4304599 Setaria italica
Seita.4G058000 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 4304100-4304599 Setaria italica
Seita.4G058000 0.5kb downstream 0.5kb downstream 5698 true scaffold_4: 4298402-4304099 Setaria italica
Seita.4G058000 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 4298402-4298901 Setaria italica
Seita.4G058000 1.0kb upstream 1.0kb upstream 6198 true scaffold_4: 4298902-4305099 Setaria italica
Seita.4G058000 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 4304100-4305099 Setaria italica
Seita.4G058000 1.0kb downstream 1.0kb downstream 6198 true scaffold_4: 4297902-4304099 Setaria italica
Seita.4G058000 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 4297902-4298901 Setaria italica
Seita.4G058000 2.0kb upstream 2.0kb upstream 7198 true scaffold_4: 4298902-4306099 Setaria italica
Seita.4G058000 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 4304100-4306099 Setaria italica
Seita.4G058000 2.0kb downstream 2.0kb downstream 7198 true scaffold_4: 4296902-4304099 Setaria italica
Seita.4G058000 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 4296902-4298901 Setaria italica
Seita.4G058000 5.0kb upstream 5.0kb upstream 10198 true scaffold_4: 4298902-4309099 Setaria italica
Seita.4G058000 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 4304100-4309099 Setaria italica
Seita.4G058000 5.0kb downstream 5.0kb downstream 10198 true scaffold_4: 4293902-4304099 Setaria italica
Seita.4G058000 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 4293902-4298901 Setaria italica
Seita.4G058000 10.0kb upstream 10.0kb upstream 15198 true scaffold_4: 4298902-4314099 Setaria italica
Seita.4G058000 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 4304100-4314099 Setaria italica
Seita.4G058000 10.0kb downstream 10.0kb downstream 15198 true scaffold_4: 4288902-4304099 Setaria italica
Seita.4G058000 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 4288902-4298901 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185104 5267 Panicoideae View MSA
124581699 5269 Grass View MSA
122046718 5273 Angiosperm View MSA
123429008 5275 Viridiplantae View MSA
121346402 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.51        
cufflinks 6.053        
cufflinks 8.149       High
cufflinks 6.86        
cufflinks 5.799        
cufflinks 5.967        
cufflinks 5.366       Low
cufflinks 6.677        
cufflinks 5.352       Low
cufflinks 8.509       High
cufflinks 6.811        
cufflinks 6.584        
cufflinks 6.043        
cufflinks 7.287        
cufflinks 6.468        
cufflinks 5.553       Low
cufflinks 9.472       High
cufflinks 6.03        
cufflinks 6.257        
cufflinks 6.789        

0 Strain