Gene : Seita.4G092700 S. italica v2.2
Defline:  (1 of 3) PTHR10502//PTHR10502:SF116 - ANNEXIN Genomic Order:  927
Name:  ? Seita.4G092700 Secondary Identifier:  ? PAC:32707633
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G092700 0.5kb upstream 0.5kb upstream 2543 true scaffold_4: 7690859-7693401 Setaria italica
Seita.4G092700 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 7692902-7693401 Setaria italica
Seita.4G092700 0.5kb downstream 0.5kb downstream 2543 true scaffold_4: 7690359-7692901 Setaria italica
Seita.4G092700 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 7690359-7690858 Setaria italica
Seita.4G092700 1.0kb upstream 1.0kb upstream 3043 true scaffold_4: 7690859-7693901 Setaria italica
Seita.4G092700 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 7692902-7693901 Setaria italica
Seita.4G092700 1.0kb downstream 1.0kb downstream 3043 true scaffold_4: 7689859-7692901 Setaria italica
Seita.4G092700 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 7689859-7690858 Setaria italica
Seita.4G092700 2.0kb upstream 2.0kb upstream 4043 true scaffold_4: 7690859-7694901 Setaria italica
Seita.4G092700 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 7692902-7694901 Setaria italica
Seita.4G092700 2.0kb downstream 2.0kb downstream 4043 true scaffold_4: 7688859-7692901 Setaria italica
Seita.4G092700 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 7688859-7690858 Setaria italica
Seita.4G092700 5.0kb upstream 5.0kb upstream 7043 true scaffold_4: 7690859-7697901 Setaria italica
Seita.4G092700 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 7692902-7697901 Setaria italica
Seita.4G092700 5.0kb downstream 5.0kb downstream 7043 true scaffold_4: 7685859-7692901 Setaria italica
Seita.4G092700 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 7685859-7690858 Setaria italica
Seita.4G092700 10.0kb upstream 10.0kb upstream 12043 true scaffold_4: 7690859-7702901 Setaria italica
Seita.4G092700 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 7692902-7702901 Setaria italica
Seita.4G092700 10.0kb downstream 10.0kb downstream 12043 true scaffold_4: 7680859-7692901 Setaria italica
Seita.4G092700 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 7680859-7690858 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122200124 5267 Panicoideae View MSA
124591082 5269 Grass View MSA
122049634 5273 Angiosperm View MSA
121311514 5274 Embryophyte View MSA
123348801 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.216        
cufflinks 2.964        
cufflinks 0.803        
cufflinks 0.657       Low
cufflinks 0.714        
cufflinks 2.97        
cufflinks 1.647        
cufflinks 2.618        
cufflinks 1.187        
cufflinks 0.148     Low Low
cufflinks 3.219        
cufflinks 3.221        
cufflinks 4.386       High
cufflinks 0.996        
cufflinks 3.736        
cufflinks 1.874        
cufflinks 3.999        
cufflinks 1.203        
cufflinks 0.715        
cufflinks 5.242       High

0 Strain