Gene : Seita.4G015900 S. italica v2.2
Defline:  (1 of 1) PTHR12329:SF11 - BAG FAMILY MOLECULAR CHAPERONE REGULATOR 2-RELATED Genomic Order:  159
Name:  ? Seita.4G015900 Secondary Identifier:  ? PAC:32706676
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G015900 0.5kb upstream 0.5kb upstream 2881 true scaffold_4: 1042325-1045205 Setaria italica
Seita.4G015900 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1042325-1042824 Setaria italica
Seita.4G015900 0.5kb downstream 0.5kb downstream 2881 true scaffold_4: 1042825-1045705 Setaria italica
Seita.4G015900 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1045206-1045705 Setaria italica
Seita.4G015900 1.0kb upstream 1.0kb upstream 3381 true scaffold_4: 1041825-1045205 Setaria italica
Seita.4G015900 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1041825-1042824 Setaria italica
Seita.4G015900 1.0kb downstream 1.0kb downstream 3381 true scaffold_4: 1042825-1046205 Setaria italica
Seita.4G015900 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1045206-1046205 Setaria italica
Seita.4G015900 2.0kb upstream 2.0kb upstream 4381 true scaffold_4: 1040825-1045205 Setaria italica
Seita.4G015900 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1040825-1042824 Setaria italica
Seita.4G015900 2.0kb downstream 2.0kb downstream 4381 true scaffold_4: 1042825-1047205 Setaria italica
Seita.4G015900 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1045206-1047205 Setaria italica
Seita.4G015900 5.0kb upstream 5.0kb upstream 7381 true scaffold_4: 1037825-1045205 Setaria italica
Seita.4G015900 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1037825-1042824 Setaria italica
Seita.4G015900 5.0kb downstream 5.0kb downstream 7381 true scaffold_4: 1042825-1050205 Setaria italica
Seita.4G015900 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1045206-1050205 Setaria italica
Seita.4G015900 10.0kb upstream 10.0kb upstream 12381 true scaffold_4: 1032825-1045205 Setaria italica
Seita.4G015900 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1032825-1042824 Setaria italica
Seita.4G015900 10.0kb downstream 10.0kb downstream 12381 true scaffold_4: 1042825-1055205 Setaria italica
Seita.4G015900 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1045206-1055205 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122188764 5267 Panicoideae View MSA
124575944 5269 Grass View MSA
122042705 5273 Angiosperm View MSA
121310003 5274 Embryophyte View MSA
123347611 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.327        
cufflinks 12.899        
cufflinks 0.367       Low
cufflinks 1.062       Low
cufflinks 3.645        
cufflinks 16.273     High  
cufflinks 24.316     High  
cufflinks 11.895        
cufflinks 13.714     High  
cufflinks 29.43     High  
cufflinks 45.019     High High
cufflinks 11.552        
cufflinks 47.44     High High
cufflinks 2.625        
cufflinks 36.872     High High
cufflinks 4.001        
cufflinks 17.729     High  
cufflinks 1.425       Low
cufflinks 1.658       Low
cufflinks 35.71     High High

0 Strain