Gene : Seita.4G021600 S. italica v2.2
Defline:  (1 of 1) PTHR10992//PTHR10992:SF875 - ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN Genomic Order:  216
Name:  ? Seita.4G021600 Secondary Identifier:  ? PAC:32708329
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G021600 0.5kb upstream 0.5kb upstream 4851 true scaffold_4: 1428380-1433230 Setaria italica
Seita.4G021600 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1428380-1428879 Setaria italica
Seita.4G021600 0.5kb downstream 0.5kb downstream 4851 true scaffold_4: 1428880-1433730 Setaria italica
Seita.4G021600 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1433231-1433730 Setaria italica
Seita.4G021600 1.0kb upstream 1.0kb upstream 5351 true scaffold_4: 1427880-1433230 Setaria italica
Seita.4G021600 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1427880-1428879 Setaria italica
Seita.4G021600 1.0kb downstream 1.0kb downstream 5351 true scaffold_4: 1428880-1434230 Setaria italica
Seita.4G021600 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1433231-1434230 Setaria italica
Seita.4G021600 2.0kb upstream 2.0kb upstream 6351 true scaffold_4: 1426880-1433230 Setaria italica
Seita.4G021600 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1426880-1428879 Setaria italica
Seita.4G021600 2.0kb downstream 2.0kb downstream 6351 true scaffold_4: 1428880-1435230 Setaria italica
Seita.4G021600 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1433231-1435230 Setaria italica
Seita.4G021600 5.0kb upstream 5.0kb upstream 9351 true scaffold_4: 1423880-1433230 Setaria italica
Seita.4G021600 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1423880-1428879 Setaria italica
Seita.4G021600 5.0kb downstream 5.0kb downstream 9351 true scaffold_4: 1428880-1438230 Setaria italica
Seita.4G021600 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1433231-1438230 Setaria italica
Seita.4G021600 10.0kb upstream 10.0kb upstream 14351 true scaffold_4: 1418880-1433230 Setaria italica
Seita.4G021600 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1418880-1428879 Setaria italica
Seita.4G021600 10.0kb downstream 10.0kb downstream 14351 true scaffold_4: 1428880-1443230 Setaria italica
Seita.4G021600 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1433231-1443230 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041325 5273 Angiosperm View MSA
122175926 5267 Panicoideae View MSA
124568352 5269 Grass View MSA
121349939 5274 Embryophyte View MSA
123428460 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.089        
cufflinks 5.289       High
cufflinks 0.02     Low Low
cufflinks 0.045     Low Low
cufflinks 0.234        
cufflinks 5.052       High
cufflinks 1.831        
cufflinks 1.774        
cufflinks 2.076        
cufflinks 2.897       High
cufflinks 2.278        
cufflinks 0.202        
cufflinks 0.717        
cufflinks 0.014     Low Low
cufflinks 1.037        
cufflinks 0.236        
cufflinks 0.369        
cufflinks 0.072     Low  
cufflinks 0.039     Low Low
cufflinks 0.919        

0 Strain