Gene : Seita.4G026900 S. italica v2.2
Defline:  (1 of 1) PF02033 - Ribosome-binding factor A (RBFA) Genomic Order:  269
Name:  ? Seita.4G026900 Secondary Identifier:  ? PAC:32707947
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G026900 0.5kb upstream 0.5kb upstream 4256 true scaffold_4: 1761148-1765403 Setaria italica
Seita.4G026900 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 1761148-1761647 Setaria italica
Seita.4G026900 0.5kb downstream 0.5kb downstream 4256 true scaffold_4: 1761648-1765903 Setaria italica
Seita.4G026900 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 1765404-1765903 Setaria italica
Seita.4G026900 1.0kb upstream 1.0kb upstream 4756 true scaffold_4: 1760648-1765403 Setaria italica
Seita.4G026900 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 1760648-1761647 Setaria italica
Seita.4G026900 1.0kb downstream 1.0kb downstream 4756 true scaffold_4: 1761648-1766403 Setaria italica
Seita.4G026900 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 1765404-1766403 Setaria italica
Seita.4G026900 2.0kb upstream 2.0kb upstream 5756 true scaffold_4: 1759648-1765403 Setaria italica
Seita.4G026900 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 1759648-1761647 Setaria italica
Seita.4G026900 2.0kb downstream 2.0kb downstream 5756 true scaffold_4: 1761648-1767403 Setaria italica
Seita.4G026900 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 1765404-1767403 Setaria italica
Seita.4G026900 5.0kb upstream 5.0kb upstream 8756 true scaffold_4: 1756648-1765403 Setaria italica
Seita.4G026900 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 1756648-1761647 Setaria italica
Seita.4G026900 5.0kb downstream 5.0kb downstream 8756 true scaffold_4: 1761648-1770403 Setaria italica
Seita.4G026900 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 1765404-1770403 Setaria italica
Seita.4G026900 10.0kb upstream 10.0kb upstream 13756 true scaffold_4: 1751648-1765403 Setaria italica
Seita.4G026900 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 1751648-1761647 Setaria italica
Seita.4G026900 10.0kb downstream 10.0kb downstream 13756 true scaffold_4: 1761648-1775403 Setaria italica
Seita.4G026900 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 1765404-1775403 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026544 5273 Angiosperm View MSA
122183977 5267 Panicoideae View MSA
124576991 5269 Grass View MSA
121344298 5274 Embryophyte View MSA
123423788 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.872        
cufflinks 8.984        
cufflinks 13.84     High  
cufflinks 11.003     High  
cufflinks 13.445     High  
cufflinks 9.747        
cufflinks 10.671        
cufflinks 17.999     High High
cufflinks 20.928     High High
cufflinks 4.623        
cufflinks 6.424        
cufflinks 2.712       Low
cufflinks 2.476       Low
cufflinks 11.911        
cufflinks 2.609       Low
cufflinks 12.931     High  
cufflinks 3.348       Low
cufflinks 8.322        
cufflinks 9.361        
cufflinks 3.118       Low

0 Strain