Gene : Seita.4G142300 S. italica v2.2
Defline:  (1 of 2) PTHR21461:SF12 - F21O3.9 PROTEIN-RELATED Genomic Order:  1423
Name:  ? Seita.4G142300 Secondary Identifier:  ? PAC:32707465
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G142300 0.5kb upstream 0.5kb upstream 4102 true scaffold_4: 16845477-16849578 Setaria italica
Seita.4G142300 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 16845477-16845976 Setaria italica
Seita.4G142300 0.5kb downstream 0.5kb downstream 4102 true scaffold_4: 16845977-16850078 Setaria italica
Seita.4G142300 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 16849579-16850078 Setaria italica
Seita.4G142300 1.0kb upstream 1.0kb upstream 4602 true scaffold_4: 16844977-16849578 Setaria italica
Seita.4G142300 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 16844977-16845976 Setaria italica
Seita.4G142300 1.0kb downstream 1.0kb downstream 4602 true scaffold_4: 16845977-16850578 Setaria italica
Seita.4G142300 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 16849579-16850578 Setaria italica
Seita.4G142300 2.0kb upstream 2.0kb upstream 5602 true scaffold_4: 16843977-16849578 Setaria italica
Seita.4G142300 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 16843977-16845976 Setaria italica
Seita.4G142300 2.0kb downstream 2.0kb downstream 5602 true scaffold_4: 16845977-16851578 Setaria italica
Seita.4G142300 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 16849579-16851578 Setaria italica
Seita.4G142300 5.0kb upstream 5.0kb upstream 8602 true scaffold_4: 16840977-16849578 Setaria italica
Seita.4G142300 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 16840977-16845976 Setaria italica
Seita.4G142300 5.0kb downstream 5.0kb downstream 8602 true scaffold_4: 16845977-16854578 Setaria italica
Seita.4G142300 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 16849579-16854578 Setaria italica
Seita.4G142300 10.0kb upstream 10.0kb upstream 13602 true scaffold_4: 16835977-16849578 Setaria italica
Seita.4G142300 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 16835977-16845976 Setaria italica
Seita.4G142300 10.0kb downstream 10.0kb downstream 13602 true scaffold_4: 16845977-16859578 Setaria italica
Seita.4G142300 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 16849579-16859578 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122194089 5267 Panicoideae View MSA
124572801 5269 Grass View MSA
122044541 5273 Angiosperm View MSA
121348152 5274 Embryophyte View MSA
123380747 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.921        
cufflinks 6.446       High
cufflinks 0.052     Low Low
cufflinks 0.042     Low Low
cufflinks 0.394        
cufflinks 5.854       High
cufflinks 4.376        
cufflinks 3.072        
cufflinks 2.794        
cufflinks 4.038        
cufflinks 3.639        
cufflinks 0.344        
cufflinks 0.398        
cufflinks 0.008     Low Low
cufflinks 1.212        
cufflinks 1.947        
cufflinks 0.512        
cufflinks 0.74        
cufflinks 0.06     Low Low
cufflinks 0.493        

0 Strain