Gene : Seita.4G140800 S. italica v2.2
Defline:  (1 of 1) PTHR12280//PTHR12280:SF31 - PANTOTHENATE KINASE Genomic Order:  1408
Name:  ? Seita.4G140800 Secondary Identifier:  ? PAC:32706690
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G140800 0.5kb upstream 0.5kb upstream 8017 true scaffold_4: 16311479-16319495 Setaria italica
Seita.4G140800 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 16311479-16311978 Setaria italica
Seita.4G140800 0.5kb downstream 0.5kb downstream 8017 true scaffold_4: 16311979-16319995 Setaria italica
Seita.4G140800 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 16319496-16319995 Setaria italica
Seita.4G140800 1.0kb upstream 1.0kb upstream 8517 true scaffold_4: 16310979-16319495 Setaria italica
Seita.4G140800 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 16310979-16311978 Setaria italica
Seita.4G140800 1.0kb downstream 1.0kb downstream 8517 true scaffold_4: 16311979-16320495 Setaria italica
Seita.4G140800 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 16319496-16320495 Setaria italica
Seita.4G140800 2.0kb upstream 2.0kb upstream 9517 true scaffold_4: 16309979-16319495 Setaria italica
Seita.4G140800 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 16309979-16311978 Setaria italica
Seita.4G140800 2.0kb downstream 2.0kb downstream 9517 true scaffold_4: 16311979-16321495 Setaria italica
Seita.4G140800 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 16319496-16321495 Setaria italica
Seita.4G140800 5.0kb upstream 5.0kb upstream 12517 true scaffold_4: 16306979-16319495 Setaria italica
Seita.4G140800 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 16306979-16311978 Setaria italica
Seita.4G140800 5.0kb downstream 5.0kb downstream 12517 true scaffold_4: 16311979-16324495 Setaria italica
Seita.4G140800 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 16319496-16324495 Setaria italica
Seita.4G140800 10.0kb upstream 10.0kb upstream 17517 true scaffold_4: 16301979-16319495 Setaria italica
Seita.4G140800 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 16301979-16311978 Setaria italica
Seita.4G140800 10.0kb downstream 10.0kb downstream 17517 true scaffold_4: 16311979-16329495 Setaria italica
Seita.4G140800 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 16319496-16329495 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185447 5267 Panicoideae View MSA
124577424 5269 Grass View MSA
122042661 5273 Angiosperm View MSA
121343944 5274 Embryophyte View MSA
123428038 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.021       High
cufflinks 5.402        
cufflinks 3.842        
cufflinks 3.373        
cufflinks 2.533       Low
cufflinks 5.187        
cufflinks 3.554        
cufflinks 4.048        
cufflinks 2.562       Low
cufflinks 4.073        
cufflinks 4.782        
cufflinks 5.6        
cufflinks 4.243        
cufflinks 4.0        
cufflinks 5.126        
cufflinks 4.86        
cufflinks 5.764       High
cufflinks 5.484        
cufflinks 3.215       Low
cufflinks 6.757       High

0 Strain