Gene : Seita.4G145900 S. italica v2.2
Defline:  (1 of 1) PTHR27002:SF31 - G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 Genomic Order:  1459
Name:  ? Seita.4G145900 Secondary Identifier:  ? PAC:32706442
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G145900 0.5kb upstream 0.5kb upstream 5169 true scaffold_4: 17750501-17755669 Setaria italica
Seita.4G145900 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 17750501-17751000 Setaria italica
Seita.4G145900 0.5kb downstream 0.5kb downstream 5169 true scaffold_4: 17751001-17756169 Setaria italica
Seita.4G145900 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 17755670-17756169 Setaria italica
Seita.4G145900 1.0kb upstream 1.0kb upstream 5669 true scaffold_4: 17750001-17755669 Setaria italica
Seita.4G145900 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 17750001-17751000 Setaria italica
Seita.4G145900 1.0kb downstream 1.0kb downstream 5669 true scaffold_4: 17751001-17756669 Setaria italica
Seita.4G145900 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 17755670-17756669 Setaria italica
Seita.4G145900 2.0kb upstream 2.0kb upstream 6669 true scaffold_4: 17749001-17755669 Setaria italica
Seita.4G145900 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 17749001-17751000 Setaria italica
Seita.4G145900 2.0kb downstream 2.0kb downstream 6669 true scaffold_4: 17751001-17757669 Setaria italica
Seita.4G145900 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 17755670-17757669 Setaria italica
Seita.4G145900 5.0kb upstream 5.0kb upstream 9669 true scaffold_4: 17746001-17755669 Setaria italica
Seita.4G145900 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 17746001-17751000 Setaria italica
Seita.4G145900 5.0kb downstream 5.0kb downstream 9669 true scaffold_4: 17751001-17760669 Setaria italica
Seita.4G145900 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 17755670-17760669 Setaria italica
Seita.4G145900 10.0kb upstream 10.0kb upstream 14669 true scaffold_4: 17741001-17755669 Setaria italica
Seita.4G145900 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 17741001-17751000 Setaria italica
Seita.4G145900 10.0kb downstream 10.0kb downstream 14669 true scaffold_4: 17751001-17765669 Setaria italica
Seita.4G145900 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 17755670-17765669 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175534 5267 Panicoideae View MSA
124582596 5269 Grass View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.977       High
cufflinks 3.292        
cufflinks 1.507       Low
cufflinks 1.432       Low
cufflinks 1.627        
cufflinks 3.256        
cufflinks 2.427        
cufflinks 1.591        
cufflinks 1.675        
cufflinks 3.957        
cufflinks 6.273       High
cufflinks 2.869        
cufflinks 4.108        
cufflinks 0.783       Low
cufflinks 4.335        
cufflinks 3.407        
cufflinks 4.676       High
cufflinks 2.993        
cufflinks 1.405       Low
cufflinks 3.545        

0 Strain