Gene : Seita.4G143700 S. italica v2.2
Defline:  (1 of 1) PTHR11362:SF38 - PROTEIN MOTHER OF FT AND TF 1 Genomic Order:  1437
Name:  ? Seita.4G143700 Secondary Identifier:  ? PAC:32707407
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G143700 0.5kb upstream 0.5kb upstream 1549 true scaffold_4: 17322766-17324314 Setaria italica
Seita.4G143700 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 17322766-17323265 Setaria italica
Seita.4G143700 0.5kb downstream 0.5kb downstream 1549 true scaffold_4: 17323266-17324814 Setaria italica
Seita.4G143700 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 17324315-17324814 Setaria italica
Seita.4G143700 1.0kb upstream 1.0kb upstream 2049 true scaffold_4: 17322266-17324314 Setaria italica
Seita.4G143700 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 17322266-17323265 Setaria italica
Seita.4G143700 1.0kb downstream 1.0kb downstream 2049 true scaffold_4: 17323266-17325314 Setaria italica
Seita.4G143700 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 17324315-17325314 Setaria italica
Seita.4G143700 2.0kb upstream 2.0kb upstream 3049 true scaffold_4: 17321266-17324314 Setaria italica
Seita.4G143700 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 17321266-17323265 Setaria italica
Seita.4G143700 2.0kb downstream 2.0kb downstream 3049 true scaffold_4: 17323266-17326314 Setaria italica
Seita.4G143700 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 17324315-17326314 Setaria italica
Seita.4G143700 5.0kb upstream 5.0kb upstream 6049 true scaffold_4: 17318266-17324314 Setaria italica
Seita.4G143700 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 17318266-17323265 Setaria italica
Seita.4G143700 5.0kb downstream 5.0kb downstream 6049 true scaffold_4: 17323266-17329314 Setaria italica
Seita.4G143700 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 17324315-17329314 Setaria italica
Seita.4G143700 10.0kb upstream 10.0kb upstream 11049 true scaffold_4: 17313266-17324314 Setaria italica
Seita.4G143700 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 17313266-17323265 Setaria italica
Seita.4G143700 10.0kb downstream 10.0kb downstream 11049 true scaffold_4: 17323266-17334314 Setaria italica
Seita.4G143700 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 17324315-17334314 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122053654 5267 Panicoideae Singleton cluster - no MSA
124591116 5269 Grass View MSA
122048394 5273 Angiosperm View MSA
121310951 5274 Embryophyte View MSA
123348320 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.021     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain