Gene : Seita.4G153200 S. italica v2.2
Defline:  (1 of 1) PTHR23115:SF162 - ELONGATION FACTOR G, MITOCHONDRIAL Genomic Order:  1532
Name:  ? Seita.4G153200 Secondary Identifier:  ? PAC:32706967
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G153200 0.5kb upstream 0.5kb upstream 22843 true scaffold_4: 20619145-20641987 Setaria italica
Seita.4G153200 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 20641488-20641987 Setaria italica
Seita.4G153200 0.5kb downstream 0.5kb downstream 22843 true scaffold_4: 20618645-20641487 Setaria italica
Seita.4G153200 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 20618645-20619144 Setaria italica
Seita.4G153200 1.0kb upstream 1.0kb upstream 23343 true scaffold_4: 20619145-20642487 Setaria italica
Seita.4G153200 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 20641488-20642487 Setaria italica
Seita.4G153200 1.0kb downstream 1.0kb downstream 23343 true scaffold_4: 20618145-20641487 Setaria italica
Seita.4G153200 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 20618145-20619144 Setaria italica
Seita.4G153200 2.0kb upstream 2.0kb upstream 24343 true scaffold_4: 20619145-20643487 Setaria italica
Seita.4G153200 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 20641488-20643487 Setaria italica
Seita.4G153200 2.0kb downstream 2.0kb downstream 24343 true scaffold_4: 20617145-20641487 Setaria italica
Seita.4G153200 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 20617145-20619144 Setaria italica
Seita.4G153200 5.0kb upstream 5.0kb upstream 27343 true scaffold_4: 20619145-20646487 Setaria italica
Seita.4G153200 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 20641488-20646487 Setaria italica
Seita.4G153200 5.0kb downstream 5.0kb downstream 27343 true scaffold_4: 20614145-20641487 Setaria italica
Seita.4G153200 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 20614145-20619144 Setaria italica
Seita.4G153200 10.0kb upstream 10.0kb upstream 32343 true scaffold_4: 20619145-20651487 Setaria italica
Seita.4G153200 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 20641488-20651487 Setaria italica
Seita.4G153200 10.0kb downstream 10.0kb downstream 32343 true scaffold_4: 20609145-20641487 Setaria italica
Seita.4G153200 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 20609145-20619144 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190425 5267 Panicoideae View MSA
124569968 5269 Grass View MSA
122041574 5273 Angiosperm View MSA
121346283 5274 Embryophyte View MSA
123424671 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.53        
cufflinks 2.552        
cufflinks 1.748        
cufflinks 0.806       Low
cufflinks 1.009       Low
cufflinks 2.827        
cufflinks 1.848        
cufflinks 2.248        
cufflinks 2.48        
cufflinks 1.493        
cufflinks 2.144        
cufflinks 3.067       High
cufflinks 1.929        
cufflinks 2.824        
cufflinks 2.896        
cufflinks 1.381        
cufflinks 3.326       High
cufflinks 1.45        
cufflinks 0.94       Low
cufflinks 3.316       High

0 Strain