Gene : Seita.4G167400 S. italica v2.2
Genomic Order:  1674 Name:  ? Seita.4G167400
Secondary Identifier:  ? PAC:32709517
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G167400 0.5kb upstream 0.5kb upstream 1016 true scaffold_4: 26301691-26302706 Setaria italica
Seita.4G167400 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 26302207-26302706 Setaria italica
Seita.4G167400 0.5kb downstream 0.5kb downstream 1016 true scaffold_4: 26301191-26302206 Setaria italica
Seita.4G167400 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 26301191-26301690 Setaria italica
Seita.4G167400 1.0kb upstream 1.0kb upstream 1516 true scaffold_4: 26301691-26303206 Setaria italica
Seita.4G167400 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 26302207-26303206 Setaria italica
Seita.4G167400 1.0kb downstream 1.0kb downstream 1516 true scaffold_4: 26300691-26302206 Setaria italica
Seita.4G167400 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 26300691-26301690 Setaria italica
Seita.4G167400 2.0kb upstream 2.0kb upstream 2516 true scaffold_4: 26301691-26304206 Setaria italica
Seita.4G167400 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 26302207-26304206 Setaria italica
Seita.4G167400 2.0kb downstream 2.0kb downstream 2516 true scaffold_4: 26299691-26302206 Setaria italica
Seita.4G167400 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 26299691-26301690 Setaria italica
Seita.4G167400 5.0kb upstream 5.0kb upstream 5516 true scaffold_4: 26301691-26307206 Setaria italica
Seita.4G167400 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 26302207-26307206 Setaria italica
Seita.4G167400 5.0kb downstream 5.0kb downstream 5516 true scaffold_4: 26296691-26302206 Setaria italica
Seita.4G167400 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 26296691-26301690 Setaria italica
Seita.4G167400 10.0kb upstream 10.0kb upstream 10516 true scaffold_4: 26301691-26312206 Setaria italica
Seita.4G167400 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 26302207-26312206 Setaria italica
Seita.4G167400 10.0kb downstream 10.0kb downstream 10516 true scaffold_4: 26291691-26302206 Setaria italica
Seita.4G167400 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 26291691-26301690 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122190914 5267 Panicoideae View MSA
124570838 5269 Grass View MSA
122042507 5273 Angiosperm View MSA
121309981 5274 Embryophyte View MSA
123347593 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.13     Low  
cufflinks 0.091     Low Low
cufflinks 0.325        
cufflinks 0.251        
cufflinks 0.141        
cufflinks 0.108     Low  
cufflinks 0.258        
cufflinks 0.324        
cufflinks 0.08     Low Low
cufflinks 0.974       High
cufflinks 0.178        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.448        
cufflinks 0.412        
cufflinks 1.175       High
cufflinks 0.195        
cufflinks 0.405        
cufflinks 0.041     Low Low
cufflinks 0.276        
cufflinks 0.826       High

0 Strain