Gene : Seita.4G169200 S. italica v2.2
Defline:  (1 of 135) PF02365 - No apical meristem (NAM) protein (NAM) Genomic Order:  1692
Name:  ? Seita.4G169200 Secondary Identifier:  ? PAC:32707099
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G169200 0.5kb upstream 0.5kb upstream 2568 true scaffold_4: 26848068-26850635 Setaria italica
Seita.4G169200 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 26850136-26850635 Setaria italica
Seita.4G169200 0.5kb downstream 0.5kb downstream 2568 true scaffold_4: 26847568-26850135 Setaria italica
Seita.4G169200 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 26847568-26848067 Setaria italica
Seita.4G169200 1.0kb upstream 1.0kb upstream 3068 true scaffold_4: 26848068-26851135 Setaria italica
Seita.4G169200 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 26850136-26851135 Setaria italica
Seita.4G169200 1.0kb downstream 1.0kb downstream 3068 true scaffold_4: 26847068-26850135 Setaria italica
Seita.4G169200 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 26847068-26848067 Setaria italica
Seita.4G169200 2.0kb upstream 2.0kb upstream 4068 true scaffold_4: 26848068-26852135 Setaria italica
Seita.4G169200 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 26850136-26852135 Setaria italica
Seita.4G169200 2.0kb downstream 2.0kb downstream 4068 true scaffold_4: 26846068-26850135 Setaria italica
Seita.4G169200 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 26846068-26848067 Setaria italica
Seita.4G169200 5.0kb upstream 5.0kb upstream 7068 true scaffold_4: 26848068-26855135 Setaria italica
Seita.4G169200 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 26850136-26855135 Setaria italica
Seita.4G169200 5.0kb downstream 5.0kb downstream 7068 true scaffold_4: 26843068-26850135 Setaria italica
Seita.4G169200 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 26843068-26848067 Setaria italica
Seita.4G169200 10.0kb upstream 10.0kb upstream 12068 true scaffold_4: 26848068-26860135 Setaria italica
Seita.4G169200 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 26850136-26860135 Setaria italica
Seita.4G169200 10.0kb downstream 10.0kb downstream 12068 true scaffold_4: 26838068-26850135 Setaria italica
Seita.4G169200 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 26838068-26848067 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122181591 5267 Panicoideae View MSA
124586234 5269 Grass View MSA
122045964 5273 Angiosperm View MSA
121351431 5274 Embryophyte View MSA
123382163 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.033     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.136        
cufflinks 0.293        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.66        
cufflinks 0.01     Low Low
cufflinks 1.242        
cufflinks 0.568        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.129        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 2.998       High
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 1.995        

0 Strain