Gene : Seita.4G101500 S. italica v2.2
Defline:  (1 of 1) PTHR11819 - SODIUM/SOLUTE SYMPORTER Genomic Order:  1015
Name:  ? Seita.4G101500 Secondary Identifier:  ? PAC:32709319
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G101500 0.5kb upstream 0.5kb upstream 5719 true scaffold_4: 8941607-8947325 Setaria italica
Seita.4G101500 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8946826-8947325 Setaria italica
Seita.4G101500 0.5kb downstream 0.5kb downstream 5719 true scaffold_4: 8941107-8946825 Setaria italica
Seita.4G101500 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8941107-8941606 Setaria italica
Seita.4G101500 1.0kb upstream 1.0kb upstream 6219 true scaffold_4: 8941607-8947825 Setaria italica
Seita.4G101500 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8946826-8947825 Setaria italica
Seita.4G101500 1.0kb downstream 1.0kb downstream 6219 true scaffold_4: 8940607-8946825 Setaria italica
Seita.4G101500 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8940607-8941606 Setaria italica
Seita.4G101500 2.0kb upstream 2.0kb upstream 7219 true scaffold_4: 8941607-8948825 Setaria italica
Seita.4G101500 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8946826-8948825 Setaria italica
Seita.4G101500 2.0kb downstream 2.0kb downstream 7219 true scaffold_4: 8939607-8946825 Setaria italica
Seita.4G101500 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8939607-8941606 Setaria italica
Seita.4G101500 5.0kb upstream 5.0kb upstream 10219 true scaffold_4: 8941607-8951825 Setaria italica
Seita.4G101500 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8946826-8951825 Setaria italica
Seita.4G101500 5.0kb downstream 5.0kb downstream 10219 true scaffold_4: 8936607-8946825 Setaria italica
Seita.4G101500 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8936607-8941606 Setaria italica
Seita.4G101500 10.0kb upstream 10.0kb upstream 15219 true scaffold_4: 8941607-8956825 Setaria italica
Seita.4G101500 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8946826-8956825 Setaria italica
Seita.4G101500 10.0kb downstream 10.0kb downstream 15219 true scaffold_4: 8931607-8946825 Setaria italica
Seita.4G101500 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8931607-8941606 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122179807 5267 Panicoideae View MSA
124579893 5269 Grass View MSA
122046935 5273 Angiosperm View MSA
121346289 5274 Embryophyte View MSA
123427439 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.849        
cufflinks 1.609        
cufflinks 3.52        
cufflinks 3.85        
cufflinks 3.47        
cufflinks 2.379        
cufflinks 0.527       Low
cufflinks 1.561        
cufflinks 0.812        
cufflinks 1.576        
cufflinks 1.402        
cufflinks 3.52        
cufflinks 5.498        
cufflinks 10.743       High
cufflinks 7.187       High
cufflinks 0.264       Low
cufflinks 6.245        
cufflinks 0.127       Low
cufflinks 1.974        
cufflinks 8.306       High

0 Strain