Gene : Seita.4G102100 S. italica v2.2
Defline:  (1 of 1) PTHR24072//PTHR24072:SF174 - RHO FAMILY GTPASE Genomic Order:  1021
Name:  ? Seita.4G102100 Secondary Identifier:  ? PAC:32708645
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G102100 0.5kb upstream 0.5kb upstream 3945 true scaffold_4: 9034071-9038015 Setaria italica
Seita.4G102100 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9034071-9034570 Setaria italica
Seita.4G102100 0.5kb downstream 0.5kb downstream 3945 true scaffold_4: 9034571-9038515 Setaria italica
Seita.4G102100 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9038016-9038515 Setaria italica
Seita.4G102100 1.0kb upstream 1.0kb upstream 4445 true scaffold_4: 9033571-9038015 Setaria italica
Seita.4G102100 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9033571-9034570 Setaria italica
Seita.4G102100 1.0kb downstream 1.0kb downstream 4445 true scaffold_4: 9034571-9039015 Setaria italica
Seita.4G102100 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9038016-9039015 Setaria italica
Seita.4G102100 2.0kb upstream 2.0kb upstream 5445 true scaffold_4: 9032571-9038015 Setaria italica
Seita.4G102100 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9032571-9034570 Setaria italica
Seita.4G102100 2.0kb downstream 2.0kb downstream 5445 true scaffold_4: 9034571-9040015 Setaria italica
Seita.4G102100 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9038016-9040015 Setaria italica
Seita.4G102100 5.0kb upstream 5.0kb upstream 8445 true scaffold_4: 9029571-9038015 Setaria italica
Seita.4G102100 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9029571-9034570 Setaria italica
Seita.4G102100 5.0kb downstream 5.0kb downstream 8445 true scaffold_4: 9034571-9043015 Setaria italica
Seita.4G102100 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9038016-9043015 Setaria italica
Seita.4G102100 10.0kb upstream 10.0kb upstream 13445 true scaffold_4: 9024571-9038015 Setaria italica
Seita.4G102100 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9024571-9034570 Setaria italica
Seita.4G102100 10.0kb downstream 10.0kb downstream 13445 true scaffold_4: 9034571-9048015 Setaria italica
Seita.4G102100 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9038016-9048015 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122183807 5267 Panicoideae View MSA
124586777 5269 Grass View MSA
122043872 5273 Angiosperm View MSA
121310204 5274 Embryophyte View MSA
123426845 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.037        
cufflinks 27.774     High High
cufflinks 1.793       Low
cufflinks 2.117       Low
cufflinks 4.816        
cufflinks 34.259     High High
cufflinks 15.553     High  
cufflinks 12.293        
cufflinks 15.145     High  
cufflinks 3.731        
cufflinks 6.086        
cufflinks 3.109        
cufflinks 13.39        
cufflinks 2.487        
cufflinks 13.492        
cufflinks 5.476        
cufflinks 3.976        
cufflinks 0.696       Low
cufflinks 7.281        
cufflinks 7.797        

0 Strain