Gene : Seita.4G100500 S. italica v2.2
Defline:  (1 of 10) PF02179 - BAG domain (BAG) Genomic Order:  1005
Name:  ? Seita.4G100500 Secondary Identifier:  ? PAC:32708122
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G100500 0.5kb upstream 0.5kb upstream 1694 true scaffold_4: 8798738-8800431 Setaria italica
Seita.4G100500 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 8799932-8800431 Setaria italica
Seita.4G100500 0.5kb downstream 0.5kb downstream 1694 true scaffold_4: 8798238-8799931 Setaria italica
Seita.4G100500 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 8798238-8798737 Setaria italica
Seita.4G100500 1.0kb upstream 1.0kb upstream 2194 true scaffold_4: 8798738-8800931 Setaria italica
Seita.4G100500 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 8799932-8800931 Setaria italica
Seita.4G100500 1.0kb downstream 1.0kb downstream 2194 true scaffold_4: 8797738-8799931 Setaria italica
Seita.4G100500 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 8797738-8798737 Setaria italica
Seita.4G100500 2.0kb upstream 2.0kb upstream 3194 true scaffold_4: 8798738-8801931 Setaria italica
Seita.4G100500 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 8799932-8801931 Setaria italica
Seita.4G100500 2.0kb downstream 2.0kb downstream 3194 true scaffold_4: 8796738-8799931 Setaria italica
Seita.4G100500 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 8796738-8798737 Setaria italica
Seita.4G100500 5.0kb upstream 5.0kb upstream 6194 true scaffold_4: 8798738-8804931 Setaria italica
Seita.4G100500 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 8799932-8804931 Setaria italica
Seita.4G100500 5.0kb downstream 5.0kb downstream 6194 true scaffold_4: 8793738-8799931 Setaria italica
Seita.4G100500 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 8793738-8798737 Setaria italica
Seita.4G100500 10.0kb upstream 10.0kb upstream 11194 true scaffold_4: 8798738-8809931 Setaria italica
Seita.4G100500 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 8799932-8809931 Setaria italica
Seita.4G100500 10.0kb downstream 10.0kb downstream 11194 true scaffold_4: 8788738-8799931 Setaria italica
Seita.4G100500 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 8788738-8798737 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122175747 5267 Panicoideae View MSA
124587315 5269 Grass View MSA
122048946 5273 Angiosperm View MSA
121350566 5274 Embryophyte View MSA
123381797 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.438        
cufflinks 0.04     Low  
cufflinks 0.016     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.049     Low  
cufflinks 0.045     Low  
cufflinks 0.033     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.017     Low Low
cufflinks 0.344        
cufflinks 0.605       High
cufflinks 2.026       High
cufflinks 0.14     Low  
cufflinks 0.045     Low  
cufflinks 0.065     Low  
cufflinks 0.032     Low  
cufflinks 0.069     Low  
cufflinks 2.339       High
cufflinks 0.272        
cufflinks 0.085     Low  

0 Strain