Gene : Seita.4G105800 S. italica v2.2
Defline:  (1 of 2) PTHR31760:SF0 - S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASES SUPERFAMILY PROTEIN Genomic Order:  1058
Name:  ? Seita.4G105800 Secondary Identifier:  ? PAC:32706227
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G105800 0.5kb upstream 0.5kb upstream 7935 true scaffold_4: 9568598-9576532 Setaria italica
Seita.4G105800 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 9568598-9569097 Setaria italica
Seita.4G105800 0.5kb downstream 0.5kb downstream 7935 true scaffold_4: 9569098-9577032 Setaria italica
Seita.4G105800 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 9576533-9577032 Setaria italica
Seita.4G105800 1.0kb upstream 1.0kb upstream 8435 true scaffold_4: 9568098-9576532 Setaria italica
Seita.4G105800 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 9568098-9569097 Setaria italica
Seita.4G105800 1.0kb downstream 1.0kb downstream 8435 true scaffold_4: 9569098-9577532 Setaria italica
Seita.4G105800 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 9576533-9577532 Setaria italica
Seita.4G105800 2.0kb upstream 2.0kb upstream 9435 true scaffold_4: 9567098-9576532 Setaria italica
Seita.4G105800 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 9567098-9569097 Setaria italica
Seita.4G105800 2.0kb downstream 2.0kb downstream 9435 true scaffold_4: 9569098-9578532 Setaria italica
Seita.4G105800 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 9576533-9578532 Setaria italica
Seita.4G105800 5.0kb upstream 5.0kb upstream 12435 true scaffold_4: 9564098-9576532 Setaria italica
Seita.4G105800 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 9564098-9569097 Setaria italica
Seita.4G105800 5.0kb downstream 5.0kb downstream 12435 true scaffold_4: 9569098-9581532 Setaria italica
Seita.4G105800 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 9576533-9581532 Setaria italica
Seita.4G105800 10.0kb upstream 10.0kb upstream 17435 true scaffold_4: 9559098-9576532 Setaria italica
Seita.4G105800 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 9559098-9569097 Setaria italica
Seita.4G105800 10.0kb downstream 10.0kb downstream 17435 true scaffold_4: 9569098-9586532 Setaria italica
Seita.4G105800 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 9576533-9586532 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185242 5267 Panicoideae View MSA
124589136 5269 Grass View MSA
122046579 5273 Angiosperm View MSA
121348098 5274 Embryophyte View MSA
123428344 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.713        
cufflinks 0.671        
cufflinks 0.468        
cufflinks 0.427       Low
cufflinks 0.625        
cufflinks 0.553        
cufflinks 0.682        
cufflinks 0.796       High
cufflinks 0.82       High
cufflinks 0.554        
cufflinks 0.53        
cufflinks 0.514        
cufflinks 0.586        
cufflinks 0.782       High
cufflinks 0.456       Low
cufflinks 0.844       High
cufflinks 0.728        
cufflinks 0.639        
cufflinks 0.324       Low
cufflinks 0.519        

0 Strain