Gene : Seita.4G131900 S. italica v2.2
Defline:  (1 of 1) PTHR12668//PTHR12668:SF18 - TRANSMEMBRANE PROTEIN 14, 15 Genomic Order:  1319
Name:  ? Seita.4G131900 Secondary Identifier:  ? PAC:32707576
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G131900 0.5kb upstream 0.5kb upstream 4901 true scaffold_4: 14067076-14071976 Setaria italica
Seita.4G131900 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 14071477-14071976 Setaria italica
Seita.4G131900 0.5kb downstream 0.5kb downstream 4901 true scaffold_4: 14066576-14071476 Setaria italica
Seita.4G131900 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 14066576-14067075 Setaria italica
Seita.4G131900 1.0kb upstream 1.0kb upstream 5401 true scaffold_4: 14067076-14072476 Setaria italica
Seita.4G131900 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 14071477-14072476 Setaria italica
Seita.4G131900 1.0kb downstream 1.0kb downstream 5401 true scaffold_4: 14066076-14071476 Setaria italica
Seita.4G131900 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 14066076-14067075 Setaria italica
Seita.4G131900 2.0kb upstream 2.0kb upstream 6401 true scaffold_4: 14067076-14073476 Setaria italica
Seita.4G131900 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 14071477-14073476 Setaria italica
Seita.4G131900 2.0kb downstream 2.0kb downstream 6401 true scaffold_4: 14065076-14071476 Setaria italica
Seita.4G131900 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 14065076-14067075 Setaria italica
Seita.4G131900 5.0kb upstream 5.0kb upstream 9401 true scaffold_4: 14067076-14076476 Setaria italica
Seita.4G131900 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 14071477-14076476 Setaria italica
Seita.4G131900 5.0kb downstream 5.0kb downstream 9401 true scaffold_4: 14062076-14071476 Setaria italica
Seita.4G131900 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 14062076-14067075 Setaria italica
Seita.4G131900 10.0kb upstream 10.0kb upstream 14401 true scaffold_4: 14067076-14081476 Setaria italica
Seita.4G131900 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 14071477-14081476 Setaria italica
Seita.4G131900 10.0kb downstream 10.0kb downstream 14401 true scaffold_4: 14057076-14071476 Setaria italica
Seita.4G131900 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 14057076-14067075 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122186594 5267 Panicoideae View MSA
124576629 5269 Grass View MSA
122045627 5273 Angiosperm View MSA
121351316 5274 Embryophyte View MSA
123426664 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.658        
cufflinks 5.904        
cufflinks 3.82       Low
cufflinks 3.687       Low
cufflinks 4.242       Low
cufflinks 5.559        
cufflinks 5.323        
cufflinks 7.544        
cufflinks 7.346        
cufflinks 13.416       High
cufflinks 7.494        
cufflinks 9.415        
cufflinks 9.315        
cufflinks 8.844        
cufflinks 9.105        
cufflinks 3.835       Low
cufflinks 10.611       High
cufflinks 5.088        
cufflinks 4.901        
cufflinks 9.557        

0 Strain