Gene : Seita.4G138500 S. italica v2.2
Defline:  (1 of 1) PTHR10110:SF101 - SODIUM/HYDROGEN EXCHANGER 4 Genomic Order:  1385
Name:  ? Seita.4G138500 Secondary Identifier:  ? PAC:32707725
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Seita.4G138500 0.5kb upstream 0.5kb upstream 3978 true scaffold_4: 15524317-15528294 Setaria italica
Seita.4G138500 0.5kb upstream 0.5kb upstream 500 false scaffold_4: 15524317-15524816 Setaria italica
Seita.4G138500 0.5kb downstream 0.5kb downstream 3978 true scaffold_4: 15524817-15528794 Setaria italica
Seita.4G138500 0.5kb downstream 0.5kb downstream 500 false scaffold_4: 15528295-15528794 Setaria italica
Seita.4G138500 1.0kb upstream 1.0kb upstream 4478 true scaffold_4: 15523817-15528294 Setaria italica
Seita.4G138500 1.0kb upstream 1.0kb upstream 1000 false scaffold_4: 15523817-15524816 Setaria italica
Seita.4G138500 1.0kb downstream 1.0kb downstream 4478 true scaffold_4: 15524817-15529294 Setaria italica
Seita.4G138500 1.0kb downstream 1.0kb downstream 1000 false scaffold_4: 15528295-15529294 Setaria italica
Seita.4G138500 2.0kb upstream 2.0kb upstream 5478 true scaffold_4: 15522817-15528294 Setaria italica
Seita.4G138500 2.0kb upstream 2.0kb upstream 2000 false scaffold_4: 15522817-15524816 Setaria italica
Seita.4G138500 2.0kb downstream 2.0kb downstream 5478 true scaffold_4: 15524817-15530294 Setaria italica
Seita.4G138500 2.0kb downstream 2.0kb downstream 2000 false scaffold_4: 15528295-15530294 Setaria italica
Seita.4G138500 5.0kb upstream 5.0kb upstream 8478 true scaffold_4: 15519817-15528294 Setaria italica
Seita.4G138500 5.0kb upstream 5.0kb upstream 5000 false scaffold_4: 15519817-15524816 Setaria italica
Seita.4G138500 5.0kb downstream 5.0kb downstream 8478 true scaffold_4: 15524817-15533294 Setaria italica
Seita.4G138500 5.0kb downstream 5.0kb downstream 5000 false scaffold_4: 15528295-15533294 Setaria italica
Seita.4G138500 10.0kb upstream 10.0kb upstream 13478 true scaffold_4: 15514817-15528294 Setaria italica
Seita.4G138500 10.0kb upstream 10.0kb upstream 10000 false scaffold_4: 15514817-15524816 Setaria italica
Seita.4G138500 10.0kb downstream 10.0kb downstream 13478 true scaffold_4: 15524817-15538294 Setaria italica
Seita.4G138500 10.0kb downstream 10.0kb downstream 10000 false scaffold_4: 15528295-15538294 Setaria italica

5 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122185042 5267 Panicoideae View MSA
124577500 5269 Grass View MSA
122048905 5273 Angiosperm View MSA
121351588 5274 Embryophyte View MSA
123428503 5275 Viridiplantae View MSA

20 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.024     Low  
cufflinks 0.085     Low  
cufflinks 0.006     Low Low
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.089     Low  
cufflinks 0.041     Low  
cufflinks 0.04     Low  
cufflinks 0.013     Low  
cufflinks 0.036     Low  
cufflinks 0.005     Low Low
cufflinks 0.114     Low  
cufflinks 0.269       High
cufflinks 0.013     Low  
cufflinks 0.357       High
cufflinks 0.099     Low  
cufflinks 0.203       High
cufflinks 0.036     Low  
cufflinks 0.347       High
cufflinks 0.231       High

0 Strain